Podospora pseudoanserina: QC764_503880
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Entry
QC764_503880 CDS
T09816
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC764_503880 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_503880 (MSH6)
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
QC764_503880 (MSH6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_21
AAA_27
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
87968502
NCBI-ProteinID:
XP_062798857
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Position
5:1587965..1591781
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AA seq
1215 aa
AA seq
DB search
MGDKTAARTPAKTPSTAKKQGQAPSTGKQQSILGFFSKTPASSANAPNSSPSVKPTPSLK
KASSSQCLQETTKSNSARRPPDATPVPSSDAPEPTSSQENRDVSTAKVSKSRTTMRDTTT
LPSSPSRKVKKAVNYAESSDEEDEEFIASLTSRKSRQRRPRAAVIDEDDEDTYEAGANEV
EEEDDEMEDFVVSDDSDAPSRSKKRKRPAAKTSAPRKKTTNPSPPRSAAPDLDGDEPMED
VPPSTSTAQKWKYDPDSIDHDEPQETVVKTTPAAKKPSSTPKPKPKAHTQEPEKRYPWLA
NILDGNKKPPTDPEFDPTSIYIPPAAEKQFSAFEKQYWDIKKNLWDTVVFFKKGKFYELY
ENDATIGHQLFDLKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMR
ERDAKAKKADKIIRRELACILTAGTLVDGSMLQDDMATYCAAIKESVVDGKPCFGIAFVD
AATGQFLISEFEDDVDLTKFETFVAQTCPRELVLEKSRLSTKALRILKNNTAPTTIWNYL
KPGTEFWDAETSRRELECNGYFSNADNQEEVWPEKLEKVKEKDLLMSALGGLVHYLRFLK
LERSLLSQGNFEPYNPIHRNGTLILDGQTLINLEIFSNTANGGVEGTLFNLLNRCITPFG
KRLFRQWVCHPLCNIQKINERLDAVDMLSNDKSALAEFSSHMSKMPDLERLISRIHAGSC
RPEDFVRVLEGFEQIDYTMNFLGTFGGGNGLVDRLISCMPDLKEPLGYWETAFDRKKARD
SKVLIPERGIEEDYDNSEDELNRIKEELAQLLEKQKTALKCRQLKFTDVGKEVYQIEVPK
STKVPSSWRQMSATAAVKRYYFRELESLVRELQETEETHSQIVKEVASRFFKKFDVDYEV
WLQAIRIISQLDCLMSLAKSSLALGLPSCRPEFVDDERSVLHFEELRHPCMINRVDDFIP
NDIHLGGEQAKINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPAVSAKLTPVDRIMSRL
GANDNIFAAQSTFFVELSETKKILAEATSRSLVILDELGRGTSSYDGLAVAQAVLHHVAS
HIGCVGFFATHYHSLATEFENHPEIRARRMQIHVDGGNRRVTFLYKLEDGVAEGSFGMHC
AAMCGIPNKVIEEAEVAAKEWEHTSRLKESLERAKTGCYIPLGVLSDVASLLRVGGEAEV
QERGVEVLLRAIEAL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagacagcagcccgcaccccggcaaagacgccgtctacagctaagaaacag
ggacaggcgccgtcaacgggcaagcagcagagcattctcggcttcttttctaagacacca
gcaagcagtgccaatgctcccaattcttcgccctcggtcaagccgacaccttccctcaag
aaagccagctcctcgcaatgcctccaggagacaaccaagtccaactctgcgcgacgacca
cctgatgctacgcctgtccccagcagtgacgcccctgagccgaccagctctcaggaaaac
agagacgttagcactgccaaggtgtcgaaatcgaggacgaccatgagggacaccacgacg
ctgcccagcagcccttcccgaaaggtcaaaaaagccgtcaactatgccgaatcatccgac
gaagaagacgaggagttcatcgcctcattgacatctcggaagagccgacagcgccgcccg
cgtgcggcggtcatcgacgaggatgatgaggacacgtacgaggcaggcgccaatgaagtt
gaagaggaggacgatgaaatggaagactttgtagtctcggacgactcagatgctccatcc
agatcgaagaagaggaaacggccggctgccaaaacctctgcgccacggaagaagaccacc
aacccatcgccgcctcgttcagctgccccagacctggacggtgacgagccaatggaagac
gtccccccgtcgacgtccaccgcacagaagtggaaatacgaccctgacagcatcgatcat
gacgagccacaggagacggtcgtcaagaccactccagctgcgaagaagccgtcgtcaaca
cccaaaccgaaaccgaaagcgcacactcaggaacccgagaagagatatccctggctggcc
aacatcctggatggcaacaaaaagccaccaaccgacccagagtttgatcccacgtccatc
tacatcccaccggcagcggagaagcagttctctgcctttgagaagcagtactgggacatc
aagaagaatctctgggataccgtcgtgttcttcaagaagggcaagttctacgagctgtac
gaaaatgatgcaaccattggtcaccagttgtttgatctgaagatgacagaccgcgtcaac
atgcgcatggtgggtgtccctgagagctcactcgatatgtgggtcaaccagttcgtcgcg
aaaggcttcaaggtcgctcgtgtggaccagatggagtccgcgcttggcaaggagatgcgc
gagcgtgacgcaaaggccaagaaggcggacaagatcatccgacgtgagcttgcttgcatc
ttgactgccggcaccctggtggacggcagcatgctccaggatgatatggccacatactgc
gcagccatcaaggagtctgttgtggatggcaagccttgctttggcattgcgtttgtggat
gccgccactggtcagtttttaatttccgagtttgaggatgatgtcgacctcaccaagttc
gagacctttgttgcccagacatgccctcgggaactggtgctggaaaagtcgcggctgtcc
accaaggcgctccgcatcctcaagaacaacactgcacctaccaccatctggaactatctc
aaacccggcaccgagttttgggatgctgagacgtcgaggcgggaactggagtgcaacggt
tacttctccaacgctgacaaccaggaggaagtctggccggagaagctcgagaaggtcaag
gagaaggacctcttgatgtcggctcttggcgggctggttcattacctgcgcttcctcaag
ctcgaacggagcttgctctcgcaagggaactttgaaccatacaatccaatccaccgcaat
ggcacgctcattttggacggccagaccctcatcaacctcgagatcttctccaacacggcc
aacggtggcgtggaaggaacgctttttaacctcctcaacaggtgtattacgccgtttggg
aagcgtctcttccggcagtgggtctgccacccgctctgcaacatccagaagatcaacgaa
cgtcttgatgcggtggacatgctcagcaacgacaagagtgcgcttgccgagttctcgtcc
cacatgagtaagatgcccgacctggagcgattgatctcgcgcatccacgccggctcctgc
agacctgaagactttgtccgtgttctcgagggctttgagcagattgactacaccatgaac
ttccttggcacttttgggggtggcaatgggctggtggaccggcttatttcttgcatgccc
gatctcaaagagccccttggttactgggagacggcctttgacaggaagaaggctcgcgac
agcaaggttctcatccccgagcgggggatcgaggaggattatgacaacagcgaggacgag
ctgaaccgcatcaaggaagagttggctcagctgctcgagaagcaaaagacggccttgaag
tgcaggcaactcaagttcaccgacgtcggcaaggaggtgtaccagattgaagtgcccaag
tcgaccaaggtgccttcgagttggcgccagatgtcagctacggccgctgtcaagcggtac
tacttccgagagctggaaagccttgtccgtgagctccaggaaaccgaggagacgcactcc
cagatcgtcaaggaggtcgcgtcaaggttctttaagaaatttgacgttgattacgaggtg
tggttgcaggccattcgcatcatctcgcagctggactgcctgatgagcttggccaagtcg
tctcttgccctcggccttcccagttgccgtccggagtttgttgatgacgagcggagcgtc
ttgcactttgaggagctccgtcacccgtgcatgatcaacagggtggatgactttattccc
aacgatatccacctcggcggcgagcaggccaagattaaccttcttactggtgccaacgcg
gctggaaagtcgactgttcttcgaatgacttgtactgccgtcatcatggcccagattggc
tgttacgtcccggctgtgtcggccaagttgactcctgtcgaccgtatcatgtctcgtctc
ggcgccaacgacaatatttttgccgcccaaagcaccttctttgttgagctgtccgaaacc
aagaagattctggccgaggctacgtcccgctcccttgttattcttgacgagctcggacgc
ggcacctcttcgtatgatggcctggctgtcgcccaagctgttcttcaccatgtggcatcc
cacattggttgtgttgggttctttgctacccactaccacagcctggcaaccgagtttgag
aaccaccctgagatccgggcgcggaggatgcagattcacgtcgacggtgggaaccggcga
gtgacgttcttgtacaaactggaggacggtgttgcagagggatcgtttggtatgcactgt
gctgccatgtgcggtattcccaacaaggtcatcgaggaggccgaggtggcggccaaggag
tgggagcacaccagccggttgaaggaaagcttggagagggccaagacggggtgttacatc
cctctcggagtgctgagcgatgtggcaagcttgctcagggttggtggtgaggcagaagtg
caggagcggggggtggaggtgctgttgcgagccattgaggcgctctga
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integrated database retrieval system
