Podospora pseudoanserina: QC764_506100
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Entry
QC764_506100 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K18725
nucleoporin POM152
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC764_506100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_506100
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC764_506100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
87968728
NCBI-ProteinID:
XP_062799116
LinkDB
All DBs
Position
5:2332630..2337044
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AA seq
1271 aa
AA seq
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MTGVGAFPQTPVAPRVGRARPTPFNNNLPPTLQHQPRRPPANPNPLPVAPQAGGAPPTAN
PPVIPLNILDAPTQRLYAVAVYAALLAWKLYDWAGVVEEDTESLWLFLKWVAIDCAFLFG
LPELRIPWLELSQPFVISAFFIHAFIDWSLMFNLGFGWQGWIIGIVKMFYDRELAISEHN
VKLSSIIHNHSLIMGKQIINILPEGSAVLNPERHPLCLSSDQKTALIPMFFNATIPVEVE
LLRTDLETGHQESIKLGRVHLRDIERKAKKNSDLDDMQSVVHFEYPAKKPGAYQLGKVLD
EYKLEVQRPGPPTFVVPCPKAWVGPTTTPGRCLADLSDLTLQVEGTPPLKITYSRAINGK
DVSFHFQSLQPEGFTSPLGAIRPTSLVQDDDEDISWARPQRVPVSVNESMYASGKWQYSV
DEVQDGFGNVVKYISPSEDPEGKAKPKELVQDFLVKERPILKLDGCDLRNPLRAARGDSK
ELPVKFGIGGTPDSTAHSLSWLFSPIDTLTDTGDHGDVVSVGTFNAKNARDKPRISAPGL
YTLKSVSSGGCEGEVREPSSCLLLNPLEPKLSLRSEEIPDTCAGNSIGLQVDLHLIGTPP
FILRYDIIENGKTRHADPVKIPGLRHQMELIPSVSGHHKYIFTHISDDVYKGVKLSGPEF
TLEQDVKPQASAILQQTIGKKACLGDHVTADVMLLGDAPFTLEWEIIHDGKRKAHKATNI
EGNEYQISTPPLTQGGEYTLALSSVQDKRGCRNFLKQELKISVRRQSPRAAFGQIEHKRK
ITGVEGSPLSLPLRLTGEGPWKVSYIKLNDDAATRQERTVRNDNGYLSVRERGTYQLVDV
WDNQCHGVIDPKTSTFEVDWFSRPDMSVLLSHGVQRTETGYRLDNVCEGDVSGFEVGMKG
TPPFSIEYEIRHKPPQGSASTAKKKFDVALRKESIQADTSKAGTYTYKFTALEDHLYNSD
RNFKPVLVEQKVNSKPTAAFAKPGQTFKYCKSEQGAEEGIPVVLSGVPPFSLEVEIKHQS
AALPEIYRTPVINSNTYEIQIPRHQLRLGTQNIRIRDVKDGSGCHSATANIGGPSIQVQL
FEAPTIYPLETRTDYCVGERISYTLSGSPPFDVWYTFDGVERKAKSTTTNFRRVAESPGE
FVITTISDKSSECKAPVNVAKTIHPMPAVKISRGKNARVDIHEGGEVEILFEFWGTPPFE
FTYTRSTNAKKGQKSVVLETRHDISHEHSKVIRASQEGTYEVVAIKDKFCAFSTMGRDEK
GDRKGQKKLGY
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtcggtgcctttcctcagacccccgtggcaccccgagtagggcgtgcccgg
ccaactcccttcaacaacaatcttccgccaaccctccaacaccagccccgacgaccaccg
gcaaaccccaatccgctgcccgtggctccccaagcaggcggcgcaccccccactgccaac
cctcccgtcattccattaaacatcctcgatgccccgacacagcgtctgtacgcggttgcc
gtctatgctgcgctcttggcatggaagctctacgactgggccggcgtggtggaggaggac
accgagtccttgtggctgtttctcaaatgggttgccatagattgcgccttcttgttcggc
ctgccagagcttaggataccatggctggaactatcgcagcccttcgttatatcggccttc
tttattcacgctttcattgactggtccttgatgttcaaccttgggtttggttggcaggga
tggatcatcggaattgtcaagatgttttatgatcgcgaactggctatttctgagcacaac
gtcaagctttccagcattattcacaaccattcgctcatcatgggcaagcaaatcatcaac
attctccccgagggctcagcggtgctcaaccccgaacgacacccgctctgcttgagcagt
gaccagaagaccgcgctcatccccatgtttttcaacgctaccattccggtcgaagtcgag
ctgcttcgcaccgatctcgaaacgggtcatcaagagtccatcaagctcggcagagtgcat
cttagggatatcgaacgaaaggccaagaagaatagcgaccttgatgatatgcagtctgtg
gtccactttgaatatcctgccaagaagcctggcgcctaccaactcggaaaagtactggac
gagtacaagttggaggtgcagcgtcctggtcccccaacctttgttgtgccttgcccaaag
gcttgggttgggcccacgacaacccccggaaggtgtctcgctgatctctcggatctgact
cttcaggtggaaggtactccgcccctcaagatcacttacagccgtgccatcaatggcaag
gatgtcagctttcactttcagagcttacagcccgagggattcacgagtcctctcggcgcc
atacggcccacgagtctggtgcaggatgacgatgaagacatctcctgggccagaccccag
cgcgttcctgtcagtgtcaacgagtccatgtacgccagcggaaagtggcagtactctgtt
gacgaggtccaggacggatttgggaacgttgttaagtacatttccccttcggaagatcca
gagggcaaagccaagcccaaggaactggtccaggacttcctcgtcaaagaacgcccaatc
cttaaacttgatggatgtgatctgaggaacccgttgagggctgccaggggtgactccaag
gagctgccggtcaagtttgggattggcggtacgcctgattcgacagcgcacagtctgagc
tggcttttctcgcccatagacacccttacagataccggagatcacggagatgtggtttcg
gttggcaccttcaatgctaaaaacgccagggacaaaccaaggatctctgctcccggtctt
tacactctcaagtctgtatcttccggtggatgtgagggtgaagtgcgggagccatcctcc
tgcttgcttttgaaccctctcgaaccaaaactctcactgcgttcagaagaaattccagac
acatgtgctggcaactcgatcggtctccaggtggaccttcacttgattggcaccccaccg
ttcatccttcgatacgatatcattgaaaacggaaaaacgagacacgcggacccggttaag
atccctggcctgcgccaccagatggagttgatccccagcgtttccgggcaccacaagtac
atcttcactcatatcagtgacgatgtctacaagggagtcaaactttcgggcccagaattc
accctggagcaggatgtcaagccgcaggcgagcgctattctccagcagaccattggtaaa
aaggcttgcttgggagaccacgtgacggcggacgtcatgctcctgggagacgcacccttc
actttggaatgggaaatcatccacgatggaaagagaaaggcccacaaggctaccaacatt
gaagggaatgagtaccaaatctcgacgccgcctttgacccagggtggcgagtacactctg
gcattgagcagcgtgcaggacaagagaggctgccgcaactttttgaagcaagagctgaag
atctcggtacgtcgccaaagcccaagggctgcgtttggccagattgagcacaagcgcaag
atcacgggcgtcgagggctcgccccttagcctgcctttgaggctcactggtgagggaccc
tggaaggtctcgtacatcaagctcaacgacgacgcggctacgcgccaagagaggactgtc
agaaacgacaatggttatctttcggtccgggaacgtggtacctaccagcttgtggatgtt
tgggacaaccaatgccatggtgttattgaccccaagacctccacatttgaggtcgactgg
ttctctcgccccgacatgtctgtgctgctctctcacggcgttcagcgaacggagactgga
taccgcctggataatgtctgcgaaggtgatgtgtctggtttcgaggtgggcatgaaggga
actcccccattctcgattgagtacgagattcgccacaagccccctcaaggatcagcgtct
actgccaagaagaagtttgatgtcgccttgagaaaggaatcaatccaagccgacacatcc
aaggccggcacatacacgtacaagttcacggcgttggaagaccacctgtacaacagcgat
cgaaacttcaagcccgtgctcgtagagcagaaggtgaacagcaagcccacggcggcattt
gccaaacctggacaaaccttcaagtattgcaagtccgagcagggtgcggaagaaggaatc
cctgtcgtcctctcaggtgtgcctccattttctctggaggtcgagatcaagcatcaaagc
gccgccctccccgagatttaccggacccccgtcatcaactcgaacacgtacgaaatccag
atccctcggcatcagcttcgccttggtacccagaacatccgcatccgcgatgtcaaggat
ggcagcggctgccactcggccacagccaacattggcggtccttcgatccaggtgcagctc
tttgaggcgcccaccatctacccgctcgagacacgcaccgactactgcgtgggtgagcgt
atctcatacaccttgtcaggcagcccaccattcgacgtctggtatacctttgacggcgtc
gagcgcaaagccaagtcaaccacgactaacttccgtcgcgtggccgagtcgcctggtgag
tttgtcatcacgaccatttcagacaagtcgtccgagtgcaaggcgcctgtcaatgtggcc
aagacgatccaccccatgccggccgtcaagatcagcaggggcaagaacgctcgcgttgat
atccacgaaggtggagaggtggagattctgttcgagttctggggcacgcctccgtttgag
tttacgtatactcgtagcacgaacgcgaagaaggggcagaagagtgttgtgttggagacg
aggcacgatattagccacgagcacagcaaggtcatccgggcgagccaggagggtacgtac
gaggttgtggccatcaaggataagttttgcgctttttcgacgatggggagagatgagaag
ggtgataggaagggacagaagaagttggggtattga
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