Podospora pseudoanserina: QC764_508800
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Entry
QC764_508800 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC764_508800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_508800
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
QC764_508800
U7-dependent histone pre-mRNA processing factors
QC764_508800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Ste5
Securin
Motif
Other DBs
NCBI-GeneID:
87969001
NCBI-ProteinID:
XP_062799543
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Position
5:complement(3658694..3661967)
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AA seq
989 aa
AA seq
DB search
MFSFCPLQGALSESTASQSLLELDGGVKILVDVGWDETFAVEKLRELEKQVPTLSFILLT
HATVAHIGAYAHCCKHIPLFSTIPAYATRPVIDLGRTLTQDLYASTPLAATTIPTSSLAE
VAYASSQAPSLNPNLLLQPPSPEEITRYFANIQAVQYSQPQQPRSSPFSPDITNLTVTAY
NSGRTLGGAIWHIQHGLESIVYAVDWNQGKENVFSGAAWLSGGHGGGGSTEVIEQLRKPT
ALVCSSRTPDATLSRAKRDEQLLESIKLCIARGGTVLIPVDSSARVLELSYLLEHAWRNE
VDNNNNNNETFRNAQLYLAGHNIGSTLKHARSLFEWMDDKIVREFEAAAGGKESHSRGQR
GGHHHDHKVAGPFDFKHLRLLERKGQVSWVLKQALEDLEPKGRVILATDSSLEWGFSKEV
LKSIAGDARNLVLLTEKPALNENRPSIARTLWEWWKERKDGVATEQTTSGETFEQVYAGG
RELEIADASKQALEGNDLSVYQQWLATKQQLQATSHGGSGMTWEAWTDLNDALSDTSTES
EESETEQQGKALNISANIKQASRKKVVLNDEDLGVNILIKKRGVYDYEVRGKKGREAMFP
AVAQRRRHDEFGDLIRPEDYLRAEEREVADRQETDPAKTKQEDSLGKKRSLIAVNAANKA
TANSKREKQPARAHSDEPDDASATGAPGNGPQTEEVDELDEEEDAPVLGPAKLVMTTHKM
SVNLRIAFVDFSGLHDKRSLHMLIPLIQPRRLVLVAGTEQESQALAADCKKLLSAQLAAN
SSNESATVDVFTPPVGTFVNASVDTNAWVVKLSDYLAKKLKWQDVNGLGIATITGVLLPG
GGFIPSDDPNDEGNKRQKTEEGGSPSSSMALTTVNNDANPRTLPTVDVLPVNLAATATVK
AASQPLHAGDLRLADLRRAMLHAGHKAEFRGEGTLLIDETVAVRKSAAGRIELESVALPF
AVGPGGGRSLMGGWWGGEGDVLCGEGEDL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcttctgcccattacaaggtgccctctccgagtccacagcatcacagtcgcta
ctcgaactcgatgggggtgtcaagatcttggtggatgtcggctgggacgagacctttgct
gttgaaaagctcagggaactagaaaaacaagtcccgactctatcattcatcctcctgacc
catgcgactgtcgcccacatcggagcctatgcgcactgctgcaaacatatccccctgttc
tcaaccatccccgcctatgcgacacgcccagtcattgatctcggccgtaccctgacacaa
gatctctatgcctccaccccattagctgcgacgacaataccaacgtcctcactcgccgaa
gtggcctacgcatcatcccaggccccatcactgaaccccaacctgctgcttcagccacca
tcccccgaggagatcacacgatactttgctaatattcaggccgtacaatactcacaacca
caacagcctcgatcctcgccattctccccagatatcaccaacttgacagtcacagcttac
aattcgggacggacactcggtggagccatctggcacattcagcacgggctcgaatctatt
gtctacgccgtcgactggaaccaaggcaaggaaaatgtcttttcaggtgccgcttggctg
agcggtggacatggcgggggaggcagcaccgaggtcatcgaacaactccgaaaaccaaca
gctctggtgtgcagcagtcgaacacctgacgccaccctctctcgggcgaagcgtgatgag
caactcttggaatcgatcaagctctgtattgcgcgaggagggacagtcttgataccggtc
gattcaagtgccagagtcttggagctttcatatcttctagagcacgcctggaggaacgag
gtggacaacaacaacaacaataacgaaacattcagaaatgcgcagctgtatctggccggt
cacaacatcggcagtactctgaagcacgccaggagcttgttcgagtggatggacgacaag
attgtgagggagtttgaagccgcggctggtggcaaggaaagccacagcaggggccagagg
ggcggacatcatcacgaccataaggtggccggaccgttcgactttaagcacctgcggctg
ctagagagaaagggacaggtttcgtgggttctcaagcaagcactggaggatcttgaacca
aaaggccgggttattctagctacagattccagcctcgagtggggcttctcgaaggaggtt
ctcaagtccattgccggtgacgcaaggaatcttgttcttctaaccgaaaagccagcactg
aacgagaacaggccatcgatcgccaggacactctgggagtggtggaaggagagaaaggac
ggtgtagcaacagagcagaccaccagtggcgagacctttgaacaggtctacgccggtggg
cgagaactagagattgctgatgcgtcaaaacaggcgctggaaggtaacgatctcagtgtt
taccaacagtggcttgcgacaaaacaacaactgcaagccacctcacatggcggaagtgga
atgacttgggaagcctggaccgacttgaacgatgctctctccgacacgtccaccgagtct
gaggagtcggaaacggaacaacagggcaaagcactcaatatttctgccaacatcaaacaa
gccagccgaaagaaggtcgtcctaaacgacgaagacttgggtgtcaacatcctcatcaag
aagcggggtgtgtatgactacgaagtcaggggtaaaaaggggcgagaagccatgttccca
gcagtagcccaacgaagacgtcacgatgagtttggcgacctcatccgaccagaagactac
ctccgcgccgaagagcgagaagtagccgacaggcaagaaaccgacccagccaagaccaaa
caagaagacagcttgggcaaaaagcgaagtctcattgccgtcaacgccgccaacaaggcc
acggcgaacagcaaacgggaaaagcaacccgcccgtgcccactcggacgagccagacgat
gccagcgccactggcgccccaggaaatggtccgcagacggaagaagtagacgaactggac
gaggaagaagacgcccccgtcctcggacctgccaagctcgtcatgaccactcacaagatg
agcgtcaacctccgcatcgcgtttgtcgacttttccggtctgcacgataaacgctcgctg
catatgctcatcccactcatccaaccccgtcggttggttctcgtcgcgggaacggagcag
gaatcacaggctcttgcggctgactgcaagaagttgctttctgcgcagctggcggctaac
tcgtccaatgaatcggcgacggtagatgtgtttacacccccggtggggacgtttgtgaat
gcctcggtggacacgaacgcctgggtggtgaagctctcggattatctggccaagaagctc
aaatggcaggatgttaatgggttgggcattgctactatcacgggtgtgctacttcccgga
ggggggtttattccctcggacgaccccaacgatgaggggaataaacggcagaagacggaa
gaaggggggtcgccttcttcgagtatggcgttgaccacggtcaataatgatgccaacccg
cgcaccctccctacggtggatgtgctaccagttaacctggcggccacggctacggtgaag
gcggcttcgcaaccgcttcatgcgggggatctgaggctggcggatctgaggagggcgatg
ttgcatgctgggcacaaggcggagtttaggggggaggggacactgttgattgacgagacg
gttgcggttaggaagagtgctgctgggaggatagagttggagagcgtggcgttgccgttt
gcggttgggcctgggggtggaaggagtttgatgggggggtggtgggggggggagggggac
gttttatgcggtgagggagaagatttatga
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