Podospora pseudoanserina: QC764_509410
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Entry
QC764_509410 CDS
T09816
Symbol
msh2
Name
(RefSeq) MSH2 protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC764_509410 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_509410 (msh2)
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
QC764_509410 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
P53_C
AAA_27
Motif
Other DBs
NCBI-GeneID:
87969057
NCBI-ProteinID:
XP_062799604
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Position
5:3850791..3854096
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AA seq
919 aa
AA seq
DB search
MSSRPELKVDDEHGFIRYYKSLPKVDEDVIRIFDRGDWYTAHGEDANFIARTVYKTTSVV
RQLGKNDHTGLPSVTMTVTVFRQFLREALYKLGKRIEIYASPNGRMNWKIVKQASPGNLQ
DVEDELGGQFEGAPVILAVKITAKASEGRTVGVCFADASVRELGVSEFLDNDLYSNFESL
VIQLGVKECLMQIDKAEKNKDPELAKLRQILDSCGIAVSERPAGEFGTKDIEQDLARLLK
DERSATLLPQTDLKLAMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKAL
NLMPGARDGAKTMSLYGLLNHCKTPVGSRLLSQWLKQPLMDKAEIEKRQQLVEVFVNDTE
LRQTMQEEHLRSIPDLYRLSKRFQRKKATLEDVVRAYQVVIRLPGFLGTLEGVMDEAARD
PLDEAYTNKLRELSNSLVKLQEMVETTVDLDALENHEFIIKPDFDDGLRVIRKRLDKLRS
DMDKEFSEAANDLDQERDKKIFLENHKVHGWCMRLTRTEAGCIRNKSRYQECSTQKNGVY
FTTKTLQAYRREFDQLSQNYNRTQSGLVNEVVSVAASYCPVLEKLGGVLAHLDVIVSLAH
CAENAPVSYTRPKIHPRGQGQTILTEARHPCMEMQDDVTFITNDVSLTRDSSSFLIITGP
NMGGKSTYIRQIGVIALMAQIGSFVPCESAELTIFDSILARVGASDSQLKGVSTFMAEML
ETANILKSATSESLIIIDELGRGTSTYDGFGLAWAISEHIIQQIGCFALFATHFHELTAL
AEKYPQVQNLHVTAHITSDRDVKREVTLLYKLAPGICDQSFGIHVAELVRFPDKVVRMAK
RKADELEDFTSKHEAGSVKYGKGDVEEGSALLKDVLVKWKDQVKGGGMTKQEMVERLREL
VRSDERLEGNPFFQSVKAL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagaccagagctcaaggtcgatgatgagcacggcttcatccgatactacaag
tcccttcccaaggtcgacgaggacgtgattcgcatattcgatcgaggtgactggtacact
gcacacggagaagatgccaatttcatcgcgcgcactgtctacaagaccacctcggttgtc
agacaactgggcaaaaatgaccacaccggcctgccatcagtcaccatgactgtcaccgtc
ttcaggcagttccttcgggaagcgttatacaagctgggaaagagaatcgagatttatgcc
agccccaacggccgcatgaactggaagattgtgaagcaagcctcgccaggcaacctgcaa
gatgtcgaggacgaacttggagggcagttcgagggggcgccagtgatcttggccgtcaaa
atcacagccaaggcatcagaaggcaggacggttggcgtgtgctttgccgatgccagcgta
agagagctcggtgtcagcgagtttctcgacaacgatctgtactccaactttgagtctctg
gtcattcaactcggcgtcaaggagtgcctcatgcagattgacaaggcagagaaaaacaag
gatccagagctggcaaagctgagacaaatcctcgacagctgtggtattgccgtttcggag
agaccagcaggcgagtttggcaccaaggacattgaacaggatctggcaaggctgctgaag
gacgagcggtctgcgacgttactcccacagaccgacttaaaacttgctatgggctcagca
gctgctctgatcaagtatcttggtgttttacacgacccttccaactttggacaatatcag
ctctaccagcacgaccttgcccagttcatgaagcttgatgccgccgcgctcaaagccctc
aatctcatgcccggtgccagggatggtgccaagaccatgagtctgtatggtctcttgaac
cactgcaagactcctgttggtagcaggctgttgtctcaatggttgaagcagcccctgatg
gacaaggccgagattgagaagcgtcagcagcttgtcgaggtgtttgtcaacgacactgag
cttcgacagactatgcaggaggagcacctcaggtctatccctgacttgtacaggctatcc
aagcgctttcagcggaagaaggcaaccctcgaagatgtcgtcagagcttaccaggttgtc
atccgcctgcccggcttcctaggcacactcgagggagtgatggacgaagccgcccgtgac
cccctcgatgaggcttacaccaacaaactccgcgagctctccaacagtctagtcaaactc
caagaaatggtcgaaaccaccgtcgacctcgacgccctcgaaaaccacgagttcatcatc
aaacccgacttcgacgacggcctccgcgtcatccgcaagcgcctcgacaagctccgctca
gacatggacaaggaattctccgaagcagccaacgacctcgaccaagagcgtgacaagaag
atctttctcgagaaccacaaagtccacggctggtgcatgcgcctgacccggacagaagca
ggctgcatccgcaacaagtcccgctatcaggaatgctcaacccagaagaatggagtctac
ttcaccaccaaaaccctccaagcctaccgccgggaattcgaccagctctcccaaaactac
aacagaacccaatccggcctcgtcaacgaagttgtcagcgtagcagcctcgtactgcccc
gttctcgaaaagctaggcggcgtcctcgcccatctggacgtgatcgtctccctcgcccac
tgcgcagagaacgcccccgtctcctacacccgtcccaaaatccacccacgaggtcaagga
caaacgatcctcaccgaagcccgccacccctgcatggaaatgcaagacgacgtcaccttc
atcaccaacgacgtctccctcacccgcgacagttcttccttcctgatcatcacaggccca
aacatgggcggcaagtcaacctacatccgccagataggcgtcatagccctcatggcacaa
atcggctccttcgtcccctgcgagtcggccgagctgaccatctttgattcgatcctcgcc
cgcgtgggggcaagcgactcgcaactaaagggggtatcaacctttatggccgaaatgctc
gaaacagccaacattctcaagtcagccacctccgaatccctgattatcatcgacgagcta
ggccgcggaacgtcgacgtacgacgggttcggtctcgcgtgggcgatttcggagcacata
atccaacagatcgggtgttttgccctgtttgcgactcattttcatgagctgaccgccctc
gcggaaaagtacccgcaggttcagaacctgcatgttacggcgcatattacgagcgacagg
gacgtgaagagggaggtgacgctgctgtataaactcgctccggggatctgcgaccagagc
tttgggattcatgtcgccgagctggtgaggtttccggacaaggttgtcaggatggcgaag
cggaaggcggacgagctggaggattttacaagtaagcacgaggcggggagtgtcaagtat
gggaagggggatgtggaggaggggagcgcgttgttgaaggatgtgctggtgaagtggaag
gatcaggtcaaggggggggggatgacgaagcaagaaatggtggagaggttgagggagctg
gtcaggagcgatgagaggttggaggggaatccgttttttcagagtgtgaaggctttgtag
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