Podospora pseudoanserina: QC764_512070
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Entry
QC764_512070 CDS
T09816
Symbol
VPS13
Name
(RefSeq) Vacuolar protein sorting-associated protein 13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsa04131
]
QC764_512070 (VPS13)
Membrane trafficking [BR:
ppsa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
QC764_512070 (VPS13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
87969296
NCBI-ProteinID:
XP_062799200
LinkDB
All DBs
Position
5:complement(2613295..2623913)
Genome browser
AA seq
3212 aa
AA seq
DB search
MLEGLVAGLLNRFLGMYVKNFDPTQLKVGIWSGDVKLRNLELRREALDQLKLPINVIEGH
LGELTLVIPWSNLRGAPVKIFIEDVFLLASPKEEAEYNEEEEERRKQRIKMEKLDSAELL
KERSQEGLSQEEQKRTQSFTESLVTKIVDNLQITVKNIHVRYEDAISAPGHPFALGITLE
EFSAISTDGQWTPTFIQDSSHTTHKLATLESLAVYWNTDTKLMGPGRELSTPDTEVTPHD
EMLANFRSMIVSGENDQSGTHQFILKPVSGQAKIELDKTGSRQVPKFKGNLLFDEIGLVL
DDQQYRDALMMVDLFHYFIRHQEYKKYQPKGVRPKEDPRAWLQFAGNAVLSKIHERNRRW
SWDYFKERRDDRRRYIELFKKKKQSQQLSAQENDDLNRLEWKLDYEDLRFWRSLARNQLK
RENAEALRNRPPAQPQQQQGWLAWAWGSKPQHQEKQDESENIQITEEQRKELYEVIDWDE
KTALAAEVDVPRDTVKMQLEASLSMGSFTLKQSPHGDTRDLISLHFDVFKAKGIKRPDSF
LADLSLGGLRVNDGTTPNSVYKEIVRVKDAPESDPDKRLSIAELEKNGNEAFFQFQVEQN
PLDGQGDVAVTAKLKPLEIVWNPNVVVGVADFFRPPDRHMESINALMETAGATVEGLREQ
TRAGLEFALEEHKTVNAKLDLQAPLIIIPESITNKKSTCLILDAGHISLTSELVDRDTMK
EVQSKQNQSYTDEDFKRLESLMYDRFLVKLTSTQVLIGPSIKETKQQLVEKDERQKLHIV
DKINVNFVVETSIIPKAPNLTKLRVSGHLPVLHVSASDAKYKTLMRIIEVAIPKFDGDQT
QTSLETRPKRPRLASNASSRSQRWADRAPSTQLLQFPSSQQAIILNDDDLDDDNDKFEDA
KDTSAKDQLKLQQRIFEFKFTVDQLRGSLYRSDPDKKRPDQLLVELVAEHFGVEYYLRPY
DMAAEVALGSVTVDDFVDNPSAEFKSIVSSGDVEDRQQARNLVHVKFVRVKKESPEFMSV
YEGIETNVDVAVSTINLVVTRKTLLTLLDFILVTFTNNNASNNASTQKAITDDDSEVDVE
VVPPEEELQQEAGAIRVKVDLKSIRMILNNDGIRLATLSFNHADVGVFLLGRTMRVNTKL
GDLTLVDDVNQGVSEDSSLRQLVTIQGKELANFRYETFDPLKPELYPGYDSSIFLRAGSV
KVNFLEEPFRKIVDFLVKFGKMQAIYNAARQAAANQANQLQQTSSRIKFDVVINTPIVVF
PRVVMPERPKRDVITAYLGEIYAQNKFAPLDDSENADIAMKLSAGIRNIRLTSNFHYTGD
RSEELELIDHVDLEFKVTYAEHKEGVKRPDFDIEGTMTDFNLRITPYQLNSLLELSRSVP
AAFAGGAEQSDEEAERDVDDATLERARTMTGFNSESSNEKLIDMGPELGTHGQAWTKLDL
VFTVNTIGLELIRAPEDAPVGDMDAASLSKFSLDSSVIKTRMDSNGSLEAELVIQAFTIF
DTRHRETNKFRRIMTSNNKDVQQFMASITMSGGEERNVIAMIAIDSPRVIFALDYLFALQ
KFITVSTQVVELPAIPDKSPIESPEEMSDADSMQVSLGRPSQSSSRGISPSKPAEAPKAP
EPKKLTFAYRVNVVDAQVILIANPLSASSEALVLGTKQVLLSQQHAFTFQISQCGMFLCR
MDRFDDSRLRIIDDFSVQMSMDSSQPQTTKIHVDVEPLILRVSLRDILLVMQTITKASEL
SGGTPANNHTAKASDQKAKQLKAPPGLKQRSASGKGGSTLAARTRASKKSVGGVSTSGRS
TKSGQLVPHDIVKAPPRHEELTATIDGVRLVLIGDLHELPILDMSIKKFTSTAANWSSNL
KAEASIEMYTNIYNFAKSAWEPLIEPWQVGLGVARDQASGVTSVDVASNRTFDVTVTTAS
IALLSKSFAFFSQDQDVLSKPRGAEAPYRIRNHTGFNVAVHAKRQSSEEPTSLRLEDGQE
APWSFEDWEKMRENVLAENGVSSVGVQLEGSGFDMVKNIRLTREGEFLYALKPKADQVLH
KLLVHVELGTDNVKYVTLRSPLLVENETDIPVEIGVYDAHEGHLLKIEKIAPGESRPAPV
GAAYLKSLLVRPDPGFGYGWSNDTLWWRDLLKRPTKTMVCKGDHAEPFYFQMSARFDKAN
PMTRNYPYMRLKLSAPVTLENLLPYDFKYRIYDKNTKKDWSNFLRKGGVSPVHVVELSHL
LLLSVDMQDTVFKPSEFAIINAGATDDFKKETHLVCKDDAGMALNLRLHYYRIPDSGGAF
KVTVYSPYVVLNKTGMDVSVRSKGFMQQAKAAAGQALIDIGNESHRKTKPMMFSFNSDDH
RNRALLKVGDSEWSKPQSFDAIGSTSEVVLNSPTRNAEIHLGVTVESGQGKYKMIKTVTL
APRYVIQNKLGEDINIREPSSSGLISLKSGAFRPLHFLNRGHVKQLCMCHPGVDNQWTAP
FNISDLGTTHIKIAKAGQRQRLVRVDILMEDATIFLNLSMEQKAWPFSMRNESDTEFTFY
QVNPNIDEDGTEDRSGWRPVRYRLPPRSIMPYAWDFPAAKHKEVCISAYNKERYVKLAEI
GNLMPMKFIGTNGQSKIIDINVTADGPTQTLILSNFKQSKSLYRQKSNAGSTTSREGFEA
KELDTGTTFRAQLRLSGIGVSLINSQLKELAYITFRDVALRYSDSPLYQTISLAVKWIQI
DNQLYGGIFPMILYPSVVPKRAQEVDAHPSLHAMVTRVKDDSYGVEYIKYATILLQEMTV
ELDEDFIYAVLEYSKIPGASWSDTVEEDKLCDDNIDVPQPKQQQSGKDIYFEVLNIQPMQ
LDLSFVRTERVNAEDKTSSRNPVMFFFNVMTMAIGNINDAPIRFNALMLENVRVSIPILI
QNISNHYSQEALYQVHKILGSADFLGNPVGLFNNISSGFADIFYEPYQGLIMSDKPEDFG
LGVARGAGSFFKKSVFGVSDSLSKVTGSFAKGLAAATMDKQFQDRRRITRARNRPKHAIY
GVTAGANSLFTSVASGVGGLARKPLEGAEQEGALGFFKGIGKGVVGLATKPAIGVLDFAS
NISEGVRNTTTVFDGSELDRVRLPRYIPADGIVRPYSQREALGQSWLKQVDNGKYFDEQY
IAHLELPTEDMVVMVTYSRILLIRSRRLQTEWDVPLKDIQTIAKERTGLSLTLRGGTNGP
FIPIGEESGRTFIYRMVAVAVEEFNRRFRGLE
NT seq
9639 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaggcctggtagctggcctgctcaaccgcttcttgggcatgtatgtcaagaac
tttgacccaacacagctcaaggtcggcatctggtccggagatgtcaagctacgcaatctc
gaattgcgccgggaggccctcgaccagctcaaacttccaataaacgttattgaggggcat
ctaggagagctcacattagtaatcccctggtccaatctacgtggtgcgccggtcaagatc
ttcatcgaagatgtgtttcttctcgcgtccccaaaggaggaggccgaatacaatgaagag
gaggaggagaggcggaagcagaggataaaaatggagaagctggactcagccgagttgctc
aaggagagatctcaagaagggctcagccaagaagagcagaagcgcacccagagcttcacc
gaaagtctggtcaccaagattgttgacaacctgcagataacagtcaagaacatccacgtt
cgctacgaggatgccatctcggccccgggtcaccccttcgccctgggtatcaccctcgaa
gagttcagcgctatcagcacagacgggcaatggacacccaccttcatccaggactcaagc
catacgacacacaagctcgcgacgttggagtcattagcggtatactggaatacagacaca
aagcttatgggtcctgggagggagttatcgacgcctgataccgaggtgacgccacatgac
gagatgctcgccaacttcaggtccatgattgtgagcggggagaacgaccaatctggcacg
catcagttcatcctgaagcctgtttccggccaggccaagatcgagctcgacaagaccgga
agtcgacaggtgcccaagttcaagggcaacctgctgtttgatgaaattggtcttgtgttg
gatgaccagcaataccgtgatgcgctgatgatggtggacctcttccattactttattcga
catcaagagtacaagaaataccagcccaagggagtcagaccaaaagaggatccgcgcgca
tggctccagtttgccggcaatgctgtgctgagcaagatccacgagcgcaacaggcgttgg
tcctgggactacttcaaagagcgcagggatgacaggaggcggtacattgagttgttcaaa
aagaagaagcagagccaacagttgtcagcccaggagaatgacgacctcaacaggctggag
tggaagctcgattacgaggatctccggttctggcgctcgctcgcccgtaaccagcttaag
agggagaatgcggaagccctcaggaaccgtccacccgcgcaaccacagcaacaacagggc
tggctggcctgggcgtggggttccaagccgcaacatcaagagaagcaggatgagtctgag
aacatccagatcaccgaggagcaacgcaaggagctttacgaggttatcgactgggatgag
aagacggcacttgccgccgaggtcgacgtaccgagggacactgtcaagatgcaactcgag
gcatctcttagcatgggaagtttcacgctcaagcaaagtccccatggtgacacccgagat
ctgattagtcttcactttgatgtgttcaaggcgaagggtattaagcgtcccgactcgttc
ctggctgacctcagtcttggtggcctgcgcgtcaacgatggcaccactcccaacagtgtc
tacaaggagattgtccgcgtcaaggatgccccggagagcgaccccgacaaacgcctgtcc
atcgctgagctggagaagaacggtaacgaggcattcttccagttccaggtcgagcagaac
cctctggatggacaaggtgatgtggctgtgactgccaagctcaagcctctggaaattgtg
tggaatcccaatgtcgtcgtaggtgtggccgacttcttcaggccaccagaccggcacatg
gagtccatcaacgcgctcatggagacagctggtgctacggtggagggccttcgggagcag
acgagagcaggtctggagtttgccttggaggaacacaagactgtcaatgccaagctcgac
ttgcaagcgccccttatcatcatccccgagagcatcaccaacaagaagtcgacatgcctg
attctggatgccggtcacatcagcctgaccagcgagctagtggacagggatacgatgaag
gaggtccagtccaagcagaaccagagctacacagacgaagactttaagcggctggaatct
ctcatgtatgatcggttcttggtcaagctcacatccactcaggtcttgattggaccctct
attaaggagacgaaacaacagctggtagagaaggacgaacgtcaaaagcttcacattgtt
gacaagatcaacgtcaattttgttgtcgagacgtccatcatccccaaagctccgaacctc
acgaagctcagagtgtctggtcatctccccgtgctacatgtcagcgcatcggatgccaag
tacaagactctcatgcgaatcatcgaagtcgcgatacccaagtttgatggtgaccagaca
caaacgtcactggaaacccgccccaagcgaccccgtctcgccagcaatgcctcgtcacgg
tcacagcggtgggcggaccgtgcgccgtctactcagcttctccagttcccctcctctcag
caagccatcatcttgaacgacgacgacttggatgatgataacgacaagtttgaagacgcc
aaagacacctctgctaaggaccagttgaagctccagcaacggatattcgagttcaagttc
acagttgaccagctcagggggtcactttaccgcagcgatcctgacaagaaacgcccagat
cagcttcttgtggaactcgtggccgaacactttggtgttgagtactaccttcggccctat
gacatggcagctgaagtggcactgggttcagtgaccgtcgacgactttgtggataaccct
tccgccgagttcaagtccatcgtgtcgtctggtgatgtagaagatcgccagcaagcgaga
aacctggttcatgtcaagtttgttagggtcaagaaggagtcgccagagttcatgagtgtt
tatgaaggcatcgagaccaacgtggatgtcgccgtctccaccatcaatctcgtcgtcacg
cgcaagactcttctcacgctgctcgacttcatcctcgtcaccttcaccaataacaatgca
agcaacaacgccagtacacaaaaagctattaccgacgatgactcggaagttgatgtggaa
gtggtccccccagaggaagagctccagcaggaggccggggcaatccgggtcaaggttgat
ctcaagagtattcgcatgatcctgaataatgatgggatccggctggccactctgtcgttc
aaccatgccgatgttggagtcttccttcttggtagaaccatgcgggtcaacaccaagctc
ggcgacctgactctggtggacgatgtcaaccagggtgtttcagaagactctagtcttcgt
caactggtaacaatccagggcaaagagctcgccaatttccggtacgagacttttgatcca
ctcaagccggagctgtacccaggctatgactcgtccatcttcttgcgtgccggttccgtc
aaggtcaatttccttgaagagcctttccggaagattgtggacttcctcgtcaagtttggc
aaaatgcaagccatctacaatgctgctcgtcaggctgcggctaaccaggccaaccagctg
caacagacgtcaagtcggataaagttcgacgttgtcatcaacacccccattgttgtcttc
cctcgagttgtgatgcccgaaaggccgaagcgagacgtcatcacggcctacctgggagag
atctatgcccagaacaagtttgccccgcttgacgattcggagaacgcagatattgccatg
aagctgtctgctggtatccgcaatattcgtctgacttccaacttccactacactggtgac
cgctcggaggagttggaactgatcgaccacgttgatctcgagttcaaggtcacgtacgcc
gagcacaaggagggcgtcaagcggcccgactttgacattgagggaaccatgactgacttc
aacctccgcatcactccctaccagctcaattctcttcttgagctgtccaggtctgtgcct
gccgcctttgctggtggtgctgagcagagtgacgaggaggctgagcgtgacgtcgacgat
gctactctggagcgtgctaggaccatgactggctttaatagcgagagtagcaacgagaag
ctcatcgacatgggccctgaacttggcactcacggccaggcctggacgaagttggacctt
gtcttcacggtcaacaccattggcttggagttgattcgtgccccggaagatgccccagtt
ggcgatatggacgctgccagtctttccaagtttagcctagattcaagcgttattaagacc
cggatggactcgaatgggagtctcgaggctgaacttgttatccaggccttcaccatcttt
gacacacggcatcgcgagaccaacaagttccgtcgcatcatgacgagcaacaacaaggat
gtccaacagttcatggccagcatcacgatgtcaggtggtgaggagaggaacgtcatcgcc
atgattgctatcgacagtcctcgtgtcatcttcgctttagactacctctttgcgttgcag
aagttcattactgttagtacgcaggttgtcgagctacctgctatcccagacaagagccca
atagagagcccggaggagatgagcgatgcagactccatgcaagttagtctcggcagacct
tcccagagtagcagccgcggaatctctccgtcgaagccagctgaagccccgaaagcaccg
gagcccaagaagttgacctttgcctaccgcgtcaacgtggttgatgcccaagtcattctc
atcgccaacccattgagtgcaagctcagaggctctcgtgctgggaacgaagcaagtcctc
ctgtcccagcagcacgccttcaccttccagatatctcaatgcggcatgttcctgtgccgg
atggaccgcttcgacgattcacggctcagaatcattgacgacttctccgtccagatgtcc
atggatagctcgcaaccgcagacaaccaagatccatgtcgatgttgagcctcttattctt
agggtctcgctccgagatattttgctggtgatgcagacaatcacaaaagcatctgagctg
tctggtggcactcccgcaaacaatcatactgctaaagcctccgatcagaaggcgaagcag
ctcaaggcaccgcctggattgaagcaacgatcggccagtggaaagggcgggtccaccctc
gctgcgagaacacgggcaagcaagaagagtgtcggcggtgtcagcacctctggtcgttcc
accaagtccgggcaactcgtgccgcatgatattgtcaaggcgcctcctagacacgaagag
ctcactgccaccattgacggagtccgtctagtgctgatcggcgatttgcacgaacttccc
attctggacatgagcatcaagaagttcacaagcaccgctgcaaactggtcttccaacctc
aaggcggaggcatccatcgagatgtacaccaacatctacaactttgccaagtccgcctgg
gagcctctgatcgagccctggcaagttggtcttggtgtagctcgtgaccaggcctctggt
gtcacctcggttgatgttgcctccaaccggacttttgatgtcactgtcaccactgctagc
attgctctcttgtccaagtccttcgccttcttttctcaggaccaggatgttttgtccaag
cctcgtggtgctgaagcaccatatcgcatccgcaaccacacggggttcaacgttgctgta
catgccaagcgacagagcagtgaagagccgacgtctctcagactggaagatgggcaggaa
gcaccttggagttttgaggactgggagaagatgcgtgagaatgttctggcagagaacggt
gttagcagcgttggggtgcagctggagggcagtggcttcgacatggttaagaacattcgc
ctaactcgagagggcgagtttttgtatgccttgaagccaaaggctgatcaggttctgcac
aagctcttggtccacgtcgagcttggaaccgacaacgtcaaatatgtgactctgcgcagt
ccattgttggttgagaacgagacggatattcctgtcgagattggtgtgtacgatgcgcac
gagggccaccttctcaaaattgagaagattgcgcccggtgagagccggccagcaccggtt
ggggctgcgtacttgaagagtttgcttgtccgtcctgatcctggatttggatatggatgg
agcaatgacacgctatggtggagggacttgcttaagcggccaaccaagacgatggtgtgc
aagggggaccatgcggagccattctatttccagatgtctgctcgcttcgacaaggcaaac
cccatgactaggaactacccatacatgcgtctcaaactctcagcaccagtcaccttggag
aacttgctgccttatgacttcaagtataggatatacgacaagaacaccaagaaggactgg
tctaacttcttgcgcaagggcggcgtcagccctgtccacgttgtcgagctgtcgcacctc
ttgctcctcagtgtcgatatgcaggacactgtgttcaagccgagcgagtttgccatcatc
aacgctggggccaccgatgacttcaagaaggaaacacatctcgtttgcaaggacgatgct
ggtatggcgctcaacctgcggctgcactactatcgtattccagacagcggtggtgcgttc
aaggtcaccgtgtacagcccctacgtcgtgctcaacaagacgggtatggatgtcagcgtc
cgttccaagggcttcatgcaacaggccaaggctgcggcgggtcaggcactcatcgacatt
ggcaacgaaagccaccgcaagaccaagcccatgatgttctccttcaatagtgacgaccac
cgcaatcgtgctctactcaaggtcggcgactcggagtggagtaagccgcagagctttgac
gcgatcgggagcacgtcggaagttgtgctcaactctccaacacggaatgccgagatccat
cttggtgttactgtcgagtcgggtcagggcaagtacaagatgatcaagacggttaccctg
gcgccaagatatgtcatccaaaacaagcttggggaagacatcaacatccgggagcccagc
tcatctggccttatctcgctcaagagtggtgccttccggccattacactttctcaacaga
ggtcatgtgaagcaactttgcatgtgccatcctggtgtcgacaaccaatggacagcacct
ttcaacatctcagatctcggcacaactcacatcaagattgccaaggctggtcagcgtcag
cgcctcgtccgggttgacattctcatggaggatgccaccatattcctcaacctgtccatg
gagcaaaaggcctggcctttctccatgcgcaatgagagtgacaccgagttcaccttttat
caggtcaaccccaatatcgatgaggatggcaccgaggaccggtctggctggaggcctgtg
cgctaccgtctgccacccaggagcatcatgccctatgcctgggacttcccagccgcgaag
cacaaggaggtttgcatcagtgcttacaacaaggagcgctatgttaagctggccgagatt
ggaaacttgatgcccatgaagtttattggcaccaacgggcagtccaagatcattgacatc
aatgtcaccgccgacggcccgacacagactctcatcctgtccaactttaagcagtccaag
agtttgtaccggcaaaagtccaacgcaggatccaccaccagtcgcgaaggcttcgaggcc
aaggagttggatacaggcactacctttagggcgcagctgcgtctgtctggcattggcgta
tccctcatcaactcacagctgaaggagttggcttacatcaccttccgtgatgtggcgctt
cggtacagtgactcgcctctctaccagactatcagcttggctgtcaagtggatccagatt
gacaaccaactctatggcggcatcttccccatgattctctaccccagcgtggttccgaag
cgcgcccaggaagttgacgctcacccgtcgctgcacgcgatggtcactcgtgtcaaggat
gattcttatggcgtcgagtacatcaagtacgctaccattctcttgcaagagatgactgtc
gaactcgacgaagacttcatctatgcggtgttggagtactccaagattccgggggcttcg
tggtcagacactgtcgaggaggacaagctctgcgatgacaacattgacgtcccgcagccc
aagcagcagcagtccggcaaggacatctactttgaggttctcaacatccagcccatgcag
cttgatctgtcttttgtgcgcacggagcgtgtcaatgccgaagacaagacttcgtcgcgg
aaccctgtcatgttcttcttcaatgtcatgaccatggccattggaaacatcaacgatgcg
cccatccggttcaacgccttgatgctggagaacgtccgtgtttcaatcccgatcctgatc
cagaacatctcgaaccactacagccaagaagcactgtaccaagttcacaagattttgggc
agtgccgacttcctcggtaacccagtcggtctgttcaacaatatcagctctggcttcgcc
gacatcttttacgaaccctaccaagggctcatcatgtctgacaaacccgaggactttggt
ctcggcgtcgcccgtggcgcgggttcgttcttcaaaaaatcggtctttggcgtcagtgac
tcgctctccaaggtcactggcagtttcgccaagggtcttgcggcggcaacgatggataag
cagttccaggacaggcgacgcattactcgtgctcgcaaccggccaaagcacgccatttac
ggcgtcactgcgggcgctaacagcctgttcacctctgttgcttcaggtgtgggaggtctg
gcgaggaagccacttgagggtgcggagcaagaaggtgcgctgggtttcttcaagggtatc
gggaagggtgtcgttggtctagccaccaaaccagccattggcgtcctggattttgcgtcg
aacatatctgaaggcgtacgcaacaccacgaccgtgtttgacggctcggaactcgatcgt
gtccgtctaccccgttacattcccgcagacggtatcgtccgcccctacagccaacgggaa
gcgcttggtcagtcatggctgaagcaagtggacaatggaaagtattttgacgagcagtac
attgcccacctggagctcccgacggaggacatggtggttatggtgacgtactcgaggatt
ttgctgattagaagccggaggttgcagacggagtgggatgtgccgttgaaggatattcag
actattgccaaggagaggacggggctgagcttgacgttgaggggggggacgaacgggccg
ttcattcctattggggaggagagtgggaggacgtttatttataggatggtggccgtggcg
gtggaggagtttaataggaggtttagggggttggagtag
DBGET
integrated database retrieval system
