Podospora pseudoanserina: QC764_608040
Help
Entry
QC764_608040 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsa03009
]
QC764_608040
04121 Ubiquitin system [BR:
ppsa04121
]
QC764_608040
Enzymes [BR:
ppsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
QC764_608040
Ribosome biogenesis [BR:
ppsa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
QC764_608040
Ubiquitin system [BR:
ppsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
QC764_608040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
TPR_26
zf-RING_2
zf-rbx1
zf-ANAPC11
RINGv
zf-C3HC4
FANCL_C
zf-RING-like
zf-RING_16
INTS1_R4
HEAT_SCC3-SA
zf-C3HC4_2
zf-C3HC4_3
PDS5
zf-RING_11
DUF6664
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
87970164
NCBI-ProteinID:
XP_062797987
LinkDB
All DBs
Position
6:3140744..3146854
Genome browser
AA seq
1596 aa
AA seq
DB search
MGLGTPKAGFGGFGGVASTSPTLSYLTPPPDFSEIPLEVVVSFKSLLKKASATKEKALQD
ILAHEQNRSSDTNGPEESVIQAFVQLYPRLSIDDSARVRELSHQVLIQLLNSAKKRIAKH
LPLFVGPWLAGTFDRDRRVSKAASEGLASFLQTKEKEVAFWKSVQVRALDYATTSLKETP
TSLSDERSTTKQDSDAKYYRVVGASVCLTLNLLAKGELDALKDGIAVYLELDALWFLAKA
EDPFVRRSFYHLIRSILDIAPELLKRRLQQLGRALIADSFKGNQSGSATDFLKALTALTR
QYSQVWGTQQHPVQRLEKFVSRGSQGGSDEYWRASSQLLSVLTDKFPSPSLDIVSALLGS
IRKGIFDRLETRSGRQQAFDLYAHAVELYLPALVPNAEFVKDNVSSLTRQFLHPNPEVST
PSPQQPDILVQLWQALVRHPGSEVRQTVELQWQNIVDEFLSRVSNSLPEVSERYQASQLA
VAAEGERWFSVLSRFSKAASLHDLAVSSSTRIIQSALDLLLRRNFKPFGCAAILQSAYRH
CPDIYRGIDTTSMIFPANGNEHARTLVTTPSLPYIISDLHETAGDRLEEIWGLLFAASTQ
ISDRGASISAVKTLVSIPSTFKFVQDLPQAQQFLISVWSEFAKSDDLGAPWAQLAETSLD
FNTLTVESIKTITTTVIGLLEEPSSRAPALQALDLVLTHAPESSIIDDDQSVRLITTLLA
LTEISDTPIAEKAKGLFQLLQHRPTESPPLFRILASQLHEAGPASLDIDTLVAQAVAAVQ
SKVLPAEDVFPSTVAWQTELSWFLNTPNPSLSLTSSMDGSYFLVQGSESTNKPSPGRDSK
GRSSPARMALFTAKLLSSGVELSSLPLEFQLELIYLLCVTNMLAADQLALSEENRLWRNI
RGQDTDDEILEYTELASNEVSNIVAASVNWRDLDMSGDSLVERLVNFMLQTVRGFNAAAF
YTAKALAALLQALVKAHGPLAKLEEWLTKLGLTRVTPDSTFVAAAILVGLNDALASSKTI
STLCARLFSEIPGYSIGSPRTLPSLVLLNLCLAVYDESQIPVEPRKQVLVLQQVTKWTDS
PEEMDYRLAAETCKAITKIFPNVKEVYGPFWEKSIQYCLWLWGQAARDDTSNRLPYIYAS
LKLMQALKSAEEVNDDLDDALAENKRAESEALIALLSVPHDAPATLPSQLVDALLSRTVS
KIPNVKLGELSDVYQAVASPSRDIQKAAFGLLHRTIPAAQEEISVNVIIEKKPANLPAEL
LSLLLNAPSPDDYTDEELYQFPAPVRSYLLTWHLVFDAYSKASYRVRSDYTENLKKDDLI
SPLLGFLADVLGHALARAIDLDKEGFTPEHVRSYSIDLADSEPAERDMNWLLIHLFYLIL
KYVPGLFKSWYLDCSSKQTKVAIQSWMGRFFSPLIISDLLDEVTEWSANQGDLEGGTDAE
ALEIKVNKPVREITASYPVDDDFGTIQIVVPQSYPLEPVDVMSVKRVAIKEDKWQSWLKG
IKAVIMFGNCSLVDGLMAFRRNISLAVKDQEECAICYSIVAQDKSLPDKKCGTCNHYFHR
YCLYKWFHNSGKNTCPLCRNPIDYLGSDTSKRKGGR
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgggactgggtacaccaaaagctggctttgggggatttggaggggtcgcatcaacttcg
ccaacactgtcctatcttacacctccacccgacttctcggaaatcccattagaggtagtt
gtgtccttcaagagcctgttgaagaaggcaagcgccaccaaagagaaggcgttgcaagac
atcctagcacatgagcaaaaccggtcctccgacaccaatggcccagaggagtcagtaata
caagcatttgtccaactctaccctcggctatccatcgatgactctgcacgagtacgcgag
ctttcccaccaagtcctgatccagctgctcaactccgcaaagaagcgcatcgcgaaacac
cttccactgttcgtaggaccttggctggctgggacatttgacagagacaggcgcgtctcc
aaagccgcgagcgaggggcttgcttcatttctacaaacaaaagagaaagaggtggctttt
tggaagtctgttcaagtccgagccctggactatgcgacgacttctttgaaggaaacgccc
acgtcgctcagtgatgaacgctcgacaaccaaacaagactctgatgccaagtactaccga
gtagttggcgcaagtgtttgcttgacactgaatctgttggcaaaaggagaacttgatgct
ctgaaggatggcattgcggtgtacctagagctcgatgcgctctggtttttggccaaagcg
gaagatccatttgtacggcggtcattctatcatttaattcgatcaatcctggacatagcc
cctgagctcttgaaacgaagactgcaacagttgggacgggcgttgatcgcagacagcttc
aaaggcaaccaatctgggtctgcaacagactttctcaaggcgctgacagctttgacccgc
caatattcccaagtatggggcacacagcaacaccccgttcagaggctggagaagtttgtc
tcccgtggttcacaaggtggatctgatgagtactggcgcgcttcaagccagctcctgtcg
gtgctgacagacaagttcccgtcaccgtcgttggacatcgtgtccgcgcttctgggctcc
attagaaagggaatatttgatcggctggaaacccgttctggtcgccaacaggcgtttgac
ttgtatgcacacgctgtcgaactttacctaccagcacttgtaccgaacgccgagtttgtg
aaggacaacgtctcgtctctcacgcgacagttcttgcacccaaatcctgaagtctctaca
ccatctccacaacagcctgacattcttgttcagctttggcaagctttggttcggcacccc
ggtagtgaagtccgccagaccgtggaattacagtggcaaaatattgtcgacgagttcctc
tcgagagtatcgaactccctgcctgaggtctcagaacggtaccaagcctctcagcttgca
gtagcagcggaaggggaacgatggttttctgtactctccaggttttccaaagctgcatcc
ctccatgaccttgccgtgtcttcgtcgaccaggatcatacaaagcgctttggatttgctg
ctcaggcgaaacttcaagccctttgggtgtgccgccatcttgcagtcggcatatcgacat
tgccctgacatttaccgtggcatcgacacgacatccatgatcttcccagcgaacggaaac
gagcatgcgcgaactttggtcaccaccccttcactgccttacatcatttccgacctccat
gaaacagccggcgatcgtcttgaagaaatttggggcctgctttttgcggcttctacccag
atatcggatcgcggagcaagcatttcggcagtcaaaactttggtctcgataccctccacg
ttcaagtttgtccaggacctccctcaagcccagcagttcctcatctcagtgtggtcagag
tttgcaaaatctgatgatttgggtgctccttgggcccagctagcagaaacctctttggac
ttcaatactttgacagtcgagtccatcaaaacaattactaccaccgtaatcggccttttg
gaggagccatcgtcccgtgcacctgcacttcaggccctagacttggtccttacacatgcg
cctgagagctccatcattgacgacgatcaatcggtgcgcctcatcactactttgcttgcc
ctcaccgagatttccgatacacctatcgccgagaaggccaaaggattgttccagttgcta
cagcatcggccaacagagtctccaccacttttcagaatcctcgccagccagctccatgaa
gcaggtcctgcatctcttgacatcgacacattggttgctcaagcggttgccgctgtccag
tccaaggtccttccggccgaggatgtttttccaagtactgtggcctggcaaaccgagctc
tcctggttcctcaacacccccaatccgtctttgtcgttgactagcagtatggatggatcg
tacttccttgtccagggcagcgaaagtacgaacaagccgtcaccaggtcgcgacagcaaa
ggccgttcttcccctgcaagaatggcacttttcacggcgaagttgctatcatccggtgtc
gagctctcgtctttgcctctggagtttcagctggaactgatctatctcctctgcgtgact
aacatgctcgcggccgatcagctcgcactgtcggaggaaaaccggctatggaggaacatc
cgtggtcaagataccgatgacgagattctagagtacacagaacttgcctcaaatgaggtc
agcaacattgttgctgcatctgtgaactggcgagaccttgacatgtcaggagacagcctg
gtagaacgacttgtgaacttcatgctccagacagtccggggcttcaatgctgctgccttt
tacactgccaaggctctcgctgctctccttcaagcactggtcaaggctcatggacctttg
gctaagttggaggaatggctgaccaaactcggccttacccgcgtcacacctgactcgacg
tttgttgcagccgctatacttgtcggtctgaatgatgcattggcttcttccaagaccatc
agcacactctgtgctcgcctgttcagtgagatcccaggatactccattggatctccccgc
acacttccatcgctggtcttgctgaatctttgcctggctgtctatgatgagagtcaaata
ccagtggagccacgcaaacaggttctcgtgttgcagcaggtgaccaagtggaccgactcc
ccagaggagatggactacaggctcgcggctgagacctgcaaagccataactaagatcttc
cccaatgtcaaggaggtttacggaccattttgggagaagtcaattcagtactgtctttgg
ctgtggggtcaggctgcgcgcgatgataccagcaatcgcctaccgtacatctacgcatcg
ctcaagctgatgcaagcgctaaaatcggctgaggaggtcaacgatgaccttgacgatgca
cttgcagaaaataaaagggccgagtccgaggccctgatcgccctcctgagtgtaccgcac
gatgcgccagccacactgcctagtcagcttgttgatgcactcttatcgcggacggtttcg
aagatccccaacgtcaagcttggcgaactatccgacgtttaccaggcagttgcgtcaccg
tctagagatatccaaaaggctgcgtttggccttctccatcggactatccccgcagcccag
gaagaaatcagcgttaatgtcatcattgagaagaagcctgccaatcttcccgctgagctt
ctgtcgctgctcctcaacgcaccgagccccgatgactatacggatgaagagctttaccag
tttccagctccagtccgatcttaccttctaacatggcatctagtctttgatgcgtacagc
aaggcttcataccgggttcgcagcgactacaccgagaatctcaagaaggatgatcttatc
agtccactactgggcttcttggccgacgtccttggtcatgctctggccagggccattgac
ctggacaaagaaggcttcacgcccgagcatgtccgctcctacagcatcgacttggctgac
tcggaacctgctgagcgtgatatgaactggttactcatccacctgttctacctgatcctg
aagtatgttcctggtctgttcaagtcatggtatcttgactgctcttccaagcagaccaag
gtcgcgattcagtcgtggatgggtcggttcttctcgccgttgatcatttccgacctgttg
gatgaagtgactgagtggtctgccaaccaaggcgacctcgaaggggggacagatgcggaa
gccctcgagatcaaggttaacaagcctgtccgagagatcactgcctcgtacccggtggat
gacgactttggcacgatccagatcgtcgtgcctcagtcgtacccgttggagcctgtcgat
gtcatgagcgtcaagcgcgtggctatcaaggaggacaagtggcagtcttggttgaagggc
atcaaagctgtcattatgtttggcaactgtagcttggtggatggattgatggcgttccgg
cgaaatatctcgcttgcggtgaaggaccaggaggagtgcgcgatttgctactcgatcgtg
gcgcaggacaagagcttgccggacaagaagtgcgggacgtgcaatcactactttcatcgg
tattgtttgtacaagtggttccataacagcgggaagaatacttgcccgctgtgcaggaat
ccgattgactatttggggtcggatacttcgaagaggaagggggggaggtag
DBGET
integrated database retrieval system
