Podospora pseudoanserina: QC764_610870
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Entry
QC764_610870 CDS
T09816
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03013
Nucleocytoplasmic transport
ppsa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC764_610870
03015 mRNA surveillance pathway
QC764_610870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_610870
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
QC764_610870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
87970434
NCBI-ProteinID:
XP_062798324
LinkDB
All DBs
Position
6:4079738..4080905
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AA seq
340 aa
AA seq
DB search
MDTDRRSRSRDPVSRDEPVDHYRPESRNRSQSRTPSEAMDRYDTHDRTSQARSPAPRNGR
PRTYSRSLSRSRSRSRSLSRSRSRSRSRSYSRDRSWSRSRSRTRSPTPQARSTKIVVERL
TKNVNEDHLREIFGQYGEIEDLDLPLNRQLGTNRGTAYILFYNEADAEAAIAHMHEATVD
GAVINVSIVLPRRKLSPAPPTARRGANINPRIPPPHQSRPFGGNVGGGRGGGHGRGSGPG
RHGNRSDTYRPRSLSRSRSRSPVQAGGNHNRRQRSPSYSSRSRSRTPPPARGGGRGSRHV
GGRYDGDDDRDNRRSASRDSYDSYDRRSRSPSRHRDRGGR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggatacggatagaagatcaagatccagggaccctgtgtctcgtgacgaaccagtcgat
cactaccggcccgaatcccgcaatcgttcccaatcgcgaaccccctccgaggccatggat
cgctacgacacacacgaccggacctcccaagcccgctctccggccccgcgcaacggaaga
cctcggacttacagtcgcagcctatcccgtagccgtagccgtagccgtagcctcagtcga
agcagaagccgcagtcgtagtcgaagctactcgcgcgatcgcagctggagtcgctcaaga
agtcgcactcgcagtcccacgccccaggccagaagcaccaagattgttgtcgaacgtctc
accaagaacgtgaacgaagaccaccttcgagagatctttggccagtacggcgagattgag
gacttggacctgcctctcaaccgtcagcttggaaccaaccgtggcacagcttacattttg
ttctacaacgaagccgacgccgaggctgccatcgcccacatgcacgaggccactgtagat
ggcgccgtcatcaacgtttccatcgtgctaccccgccgcaagctctcacctgcaccccct
acagctcgccgcggagcaaatattaacccgcgtataccgcctcctcatcagtccagaccc
tttggcggcaacgtaggtggtggtcggggagggggtcatggacgtggatctgggccaggt
cgtcatgggaaccgttctgatacctaccgtccccgttctctctcaaggtcgagatctcgg
tcacccgttcaggcaggagggaatcataatcgcaggcaaagatccccttcgtattcatcc
cggtctcgatctaggactccaccaccagcccgcggtggaggacgagggagtcgccatgtc
ggtgggcgctacgacggcgacgacgatagggataatcgcagaagcgctagccgcgacagc
tatgatagttacgaccgtaggagcagaagccccagtcgccatcgggaccgtggagggagg
tga
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