KEGG   Podospora pseudoanserina: QC764_703200
Entry
QC764_703200      CDS       T09816                                 
Symbol
SMD2
Name
(RefSeq) mRNA splicing protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
ppsa  Podospora pseudoanserina
Pathway
ppsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    QC764_703200 (SMD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppsa03041]
    QC764_703200 (SMD2)
   03032 DNA replication proteins [BR:ppsa03032]
    QC764_703200 (SMD2)
Spliceosome [BR:ppsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    QC764_703200 (SMD2)
  U2 snRNP components
    QC764_703200 (SMD2)
 Complex B
  U1 snRNP components
    QC764_703200 (SMD2)
  U4/U6.U5 tri-snRNP components
    QC764_703200 (SMD2)
 Complex C
  U2 snRNP components
    QC764_703200 (SMD2)
DNA replication proteins [BR:ppsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     QC764_703200 (SMD2)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 87970843
NCBI-ProteinID: XP_062795970
LinkDB
Position
7
AA seq 116 aa
MSDVNIQALLNKPRNECTEYEIAQLEAYEMSNGPLSLLQTAVRSHSQVLISIRSNRKLLA
RVKAFDRHCNMILENVKEMWTETPVHNGKKGRPVNKDRFISKMFLRGDSVILVLLS
NT seq 351 nt   +upstreamnt  +downstreamnt
atgtctgacgttaacatccaggcacttctcaacaagcctcgtaacgagtgcactgagtat
gagattgctcaactggaagcctatgagatgagcaatgggccgctttccctcctccagacg
gccgtccgcagtcactctcaggttttgattagcattcggtcaaatcgcaagcttcttgcc
agagtgaaggcttttgacaggcattgcaacatgattcttgagaacgtcaaagagatgtgg
accgagactccagtacacaacggaaagaagggccggccggtgaacaaggatcggtttatc
agcaagatgttcttgcggggtgatagtgtcattctcgttttgctcagctga

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