Podospora pseudoanserina: QC764_703200
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Entry
QC764_703200 CDS
T09816
Symbol
SMD2
Name
(RefSeq) mRNA splicing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC764_703200 (SMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsa03041
]
QC764_703200 (SMD2)
03032 DNA replication proteins [BR:
ppsa03032
]
QC764_703200 (SMD2)
Spliceosome [BR:
ppsa03041
]
Complex A
U1 snRNP components
Sm proteins
QC764_703200 (SMD2)
U2 snRNP components
QC764_703200 (SMD2)
Complex B
U1 snRNP components
QC764_703200 (SMD2)
U4/U6.U5 tri-snRNP components
QC764_703200 (SMD2)
Complex C
U2 snRNP components
QC764_703200 (SMD2)
DNA replication proteins [BR:
ppsa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
QC764_703200 (SMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
87970843
NCBI-ProteinID:
XP_062795970
LinkDB
All DBs
Position
7
Genome browser
AA seq
116 aa
AA seq
DB search
MSDVNIQALLNKPRNECTEYEIAQLEAYEMSNGPLSLLQTAVRSHSQVLISIRSNRKLLA
RVKAFDRHCNMILENVKEMWTETPVHNGKKGRPVNKDRFISKMFLRGDSVILVLLS
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgttaacatccaggcacttctcaacaagcctcgtaacgagtgcactgagtat
gagattgctcaactggaagcctatgagatgagcaatgggccgctttccctcctccagacg
gccgtccgcagtcactctcaggttttgattagcattcggtcaaatcgcaagcttcttgcc
agagtgaaggcttttgacaggcattgcaacatgattcttgagaacgtcaaagagatgtgg
accgagactccagtacacaacggaaagaagggccggccggtgaacaaggatcggtttatc
agcaagatgttcttgcggggtgatagtgtcattctcgttttgctcagctga
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