Podospora pseudoanserina: QC764_708430
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Entry
QC764_708430 CDS
T09816
Symbol
SNF5
Name
(RefSeq) SWI/SNF chromatin-remodeling complex subunit
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03082
ATP-dependent chromatin remodeling
ppsa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
QC764_708430 (SNF5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
QC764_708430 (SNF5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppsa01009
]
QC764_708430 (SNF5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsa03021
]
QC764_708430 (SNF5)
03036 Chromosome and associated proteins [BR:
ppsa03036
]
QC764_708430 (SNF5)
Protein phosphatases and associated proteins [BR:
ppsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
QC764_708430 (SNF5)
Transcription machinery [BR:
ppsa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
QC764_708430 (SNF5)
SWI/SNF complex
QC764_708430 (SNF5)
Chromosome and associated proteins [BR:
ppsa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
QC764_708430 (SNF5)
PBAF complex
QC764_708430 (SNF5)
SWI/SNF complex
QC764_708430 (SNF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
RMI1_N_N
TH_ACT
Motif
Other DBs
NCBI-GeneID:
87971327
NCBI-ProteinID:
XP_062796479
LinkDB
All DBs
Position
7
Genome browser
AA seq
779 aa
AA seq
DB search
MAALQGSAPPALGTSSTSTTAADLPPDTDVQVDGPSSSHQPSASTPADGPTKSSATSPEP
EDGDAALPIRDKDSFTRVMVDRFQTRDWVHSSLLGEDQIRLEKTTKDVLARTSDFKTYKE
FYHQYPARLYGEGYRGYGNGYTENGGTTKLIYPSQRRRPGRRATPPVKFTKSQIKKQAEQ
PEELVPVRIDVDYDKIKLRDTFTFNLYERLVSVEHFAAELVEDMGLEPPLAKPVYDQVVA
QMTEQLQDFFPFVHSEEEALDPELPYSAYKNDEMRILIKLNITIGAHTLVDQFEWELNNP
LNSPEEFAACMARDLSLSGEFTTAIAHCIREQVQLFTRSLYSVGHPFDGRPIEDPDLLAA
FLPTPLPSVFRPQQQAKDYAPYLYENTEAELERTENMFSREQRRQKRSTNRRGGPQLPDL
KERQRTIRTSIVSSVLPGAALNIEESRLFKRAIGAGAGRGGKRTLRDGVDLSDSEDSDES
DPDSPAVSQLQGTARTRGMRGAATAAAQRMANIGRSETPEAVIHHHETRTSRRYGREATR
EQTEDVPQQYMITLRVNPARLRKFMREYKPRPLAALGSATPTPVHLRAPGVAGSMGPPST
PSAAGGAVAPNVQNQQDGIPAPPPNPDGTQPKIAAPPPPAWLTACLDELRRDYPNDIFDS
TMRYFAINSETGNSMPLPLTPEQMALPTTKYVFLPRIKCADCPGKSYTVGPEHTVKGFEV
HLRKNNTHQERVRARLAGGGGLLVVGDGRSPSVGAGSGAPAGGTGIVIPALNPNHTRTS
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctccaagggtcagcaccaccagcactgggcacgtcgtccacgtcgaccact
gccgccgacctcccccctgacaccgacgtccaggtcgacggcccatcatcttcccaccag
ccttctgcatccacacctgccgatggcccaactaaatcctctgccacaagccccgagccc
gaggatggggatgcggcgctccccatacgcgacaaggacagcttcacaagagtcatggtg
gaccgcttccagacacgcgactgggttcattcttctcttctcggcgaagatcaaatacgg
ctcgaaaagactaccaaggatgtgcttgcgcgcaccagtgacttcaagacctacaaggag
ttctatcaccagtatccggctaggttatatggtgaaggctaccgcggttatggcaacggc
tatacggagaatggtgggactaccaagctcatatatccctcccagaggcgtcgccccggt
cgcagggccacgccacctgtcaagttcacaaagtcccagatcaagaagcaggcagagcag
cctgaagaactggttcccgtccggatagatgtggactacgacaaaatcaagctccgggat
acctttaccttcaacctctatgagcgcctcgtttcagtcgaacactttgccgctgaactg
gtcgaagacatgggcctcgaaccgcctctggccaaacctgtctatgaccaagtggttgcc
cagatgacggaacagctccaggattttttccccttcgtccactcggaagaggaagccctc
gaccccgagctcccctattcggcatacaagaatgacgagatgcgcatcctgatcaaactc
aacatcaccattggggcacacacgctcgtggaccagtttgaatgggagctcaacaacccc
ctgaactcgcccgaggaatttgctgcttgcatggcccgggacctctctctgtcgggcgag
ttcacaaccgccattgctcactgcatcagggaacaggtccagctcttcacgcgcagtctg
tacagtgtgggccatccattcgacggccggccaatcgaggatccagacctccttgctgcc
ttcttgcctacaccccttccatctgtgttccgacctcaacaacaggccaaggactacgca
ccgtacttgtacgagaataccgaggccgaactggaacgaaccgaaaacatgttctcacgt
gagcagaggcgacagaagcgttctaccaacagacgtggtgggcctcagttgccggatctt
aaggaaaggcaaaggaccatccgaacttcgatcgtatcctcggtgctgcccggtgcagct
ctaaacattgaggaaagccggctgttcaagcgcgccattggtgctggggctggcagggga
ggcaagaggacactcagagatggtgtcgacctttcagactcggaagacagtgacgagtct
gatcctgattcaccggccgtgtctcagcttcaagggaccgccagaaccaggggtatgcgc
ggcgccgccacggcagctgcccagcgcatggccaatattggccgatccgagacccctgag
gctgtcatccaccaccacgagacccgaacgtctcggcggtatggccgggaggccaccagg
gagcagacagaagatgtgccacagcaatacatgatcactctgcgtgtcaacccggctcga
cttaggaagtttatgcgggagtacaagccgaggccgctggcagcgctaggctcagctaca
ccaacgcctgttcacctacgagctccgggcgtggcgggttcgatgggcccaccgtcaaca
ccatcagcagcaggcggcgccgtggcccctaatgttcagaaccagcaagatggcattccg
gctccaccaccgaacccggatggcacacaacccaagattgcagccccaccaccaccagcg
tggctcacagcctgtcttgatgagcttcgccgcgactaccccaacgacatctttgactct
acaatgcggtactttgccatcaactccgaaacagggaactcgatgcctttgcctctcacc
ccggaacagatggccttgcccacgacaaaatacgtattcttgcctaggatcaagtgtgca
gactgtccgggcaagagttataccgttggtccggagcacacggtcaagggctttgaggtg
catctgaggaagaacaacacgcatcaggagagggtcagggcgaggctggccggaggcggc
gggctgctagtggtgggagatgggaggagtccgagtgttggggccggtagtggggcgcca
gctggagggacggggatcgtcatacccgccttgaatccgaatcatacgcggacttcctag
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integrated database retrieval system
