Podospora pseudoanserina: QC764_709250
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Entry
QC764_709250 CDS
T09816
Symbol
YKU80
Name
(RefSeq) ATP-dependent DNA helicase yku80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QC764_709250 (YKU80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsa03400
]
QC764_709250 (YKU80)
DNA repair and recombination proteins [BR:
ppsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
QC764_709250 (YKU80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
Ku_C
ZMYND11_CC
Motif
Other DBs
NCBI-GeneID:
87971411
NCBI-ProteinID:
XP_062796571
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Position
7
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AA seq
725 aa
AA seq
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MADKESTVYVVDLGESMADCHNGRVESDLDFGMRYVWDKISDTVAASRKTWTIGFVGFNT
DETENELANKDKLEGYDNISVLQPIGPMSMTELRELRSKVQPSRSYGADPVSAVVVALKM
LEKYNPKHKIKRRVILVTNGESSIDDEELDHIAVVFNELKVELIVIGIDFDDADYGFKEE
DKSTNKKNNEKAFQQLVEKCNDGVFGTMQQAVDELSIPRIKPVRPFKAYDGPLTLGDPDK
YPSAISFHVERYYKTKRASAPSASTVVVSNNNGFSQTQTYKDEDGDSEMGGAEFSGVKQM
RTYKVNDPDAPGGKRDVDFEELAKGYQYGRTVVPFGESDLSITKYSTKKSFTIIGFIPFD
SYNPFINMGETGLIVPQKMNEEAELGLSAFIHALYEADSYAVARYVQKDEAAVQILLLKP
NTGLEDEFECLYDVPLPFAEDIRSYQFPPLDKVLTVSGSVLKEHRLLPNDDLKDAVSDFV
DAMDLSNYDVDEDGKPVDYAPVDEVYNPIIHRMNQAIRARAVDPDSPIGQPAEILLRYSK
PPKKLLDKAKHEIGNLIDAAELKKVPEKAKGRFSKKDAVKPLSGLDIDSLLGGQPKRAAI
SSENAIPEFKQMLAAAEDDETIEKAVKQMGEIVRKLIKDSFADVFYSRAAENLGVMREEL
LGFEMPMLYNKLLRALRKSLLSGELDGDRREMWYKHIVGGGLGLITKEELDVSDVTEEEA
KAFAK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaatccacagtctacgtcgtcgacctaggcgagtcaatggccgattgc
cataacggccgcgtcgaatctgatctcgattttggtatgcgctatgtttgggacaagatt
tcagataccgtcgcggcaagcaggaagacgtggaccataggtttcgttggcttcaacacc
gacgagacagagaacgaactcgcgaataaagataagctcgagggctacgataacatctct
gtgttacagcccatcggccccatgagcatgacggagctcagagaattgcgctccaaggtc
cagccgtccaggagctatggtgccgatccggtttctgctgttgtggtggcactgaagatg
cttgagaagtacaatccaaagcacaagatcaagcggagggtaatccttgtcaccaatggc
gagtcgagcattgatgatgaagagctggaccacatcgctgtggtattcaacgagttgaaa
gttgaactgattgtgattggtatcgattttgacgacgctgactacggctttaaggaagaa
gacaagtctaccaacaagaaaaacaacgaaaaggcatttcagcaactggtggaaaagtgc
aatgacggcgtgttcggcaccatgcaacaggccgtggatgagctgtcaatacctcggatc
aagccagtacgaccattcaaggcctatgatgggcctttgaccctcggagacccagacaaa
tatccaagcgccatcagcttccacgtggagcgttactacaagaccaaacgggcttctgcg
ccatcagcaagcaccgtcgtggtcagcaacaataacggattcagtcaaacacagacctac
aaagacgaagatggggattctgagatgggcggagccgagttctccggcgtcaagcaaatg
cgcacctacaaggtcaacgatcccgacgccccaggaggcaagagagacgttgattttgaa
gagcttgcaaagggctaccagtatggccgcacggtggttccgtttggcgagtccgatctg
tccatcacaaagtactcgaccaaaaagtcattcaccatcatcgggttcatcccctttgac
agttacaatccctttatcaacatgggcgaaacgggtctgattgtgccccagaaaatgaac
gaggaggccgaattgggactttcggcattcattcatgctctctatgaggctgactcgtat
gctgttgccagatatgtgcaaaaggatgaggctgcagttcagattcttcttctcaagccc
aacactggtcttgaggatgagtttgagtgcctttacgatgtacctctgccctttgccgag
gatatccgaagttaccaattcccgcccttggacaaggtgcttaccgtgtctgggagtgtg
ctcaaggagcatcgactgttgccaaacgatgatttgaaggacgctgtgagcgactttgtt
gacgcaatggatttgtcgaactatgatgttgatgaggatggaaaaccagtagactatgca
cccgtagacgaggtgtacaacccaatcatccaccggatgaaccaggccatccgagcccgg
gctgttgacccagactcgcccatcgggcaaccagccgagattctgttgaggtactccaag
cctccaaagaagctcctcgataaagccaagcacgaaatcggcaacctcatcgatgccgca
gaactcaagaaggttcccgaaaaggccaaaggtcgcttcagcaaaaaagacgccgtcaag
cccctctccggtctcgacattgactccctccttggcggtcaacccaagcgcgctgccatc
tcttcagaaaacgctattcccgagttcaagcagatgctcgccgcagctgaggacgacgag
acgatcgagaaggctgtcaagcaaatgggcgagattgttcggaagctcatcaaggacagc
tttgctgatgtgttttactcgcgggctgctgaaaatttgggtgttatgagggaggagttg
cttgggttcgagatgccgatgctgtacaacaagcttctgagagcgctgaggaagagcttg
ctgagtggtgagctggatggtgaccggagggagatgtggtataagcatattgtgggtggt
ggactggggctcatcacgaaggaggagctggatgtttcggatgtgaccgaggaggaggcc
aaggcttttgcgaagtga
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