Podospora pseudoanserina: QC764_710470
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Entry
QC764_710470 CDS
T09816
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_710470
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
QC764_710470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
87971531
NCBI-ProteinID:
XP_062796698
LinkDB
All DBs
Position
7
Genome browser
AA seq
1070 aa
AA seq
DB search
MSSKEEQKRQRAVPKFGSFQPKPTPEPEAGPASGEARKSVRDRHGDPGGESKRGHDGRHR
ERRRDSRNRGDERRRDRERDGDRRRSGSRDGDGEKERDRHRERDRDRDRKRPKDREQHHW
SREDSVQPKTLSDNFFIDKKGDPLILRYSGNDRSKIPAYHRSGHGKILGSRGHLILHRDG
PRDLFSLSFSREGLGSAFRDKALLSQIRRAKSHRIRSSTKPPPSPTDQFISLTPPSSKKR
KRGRESPSSSDPEDQQDRKPDYRSIYGKAKPPPSDSESESSDSETSSPEQEKKELSSARK
ESVSLTRHLRSSPADIPSWLRLISLQDTLFAQDVGHSRPRTGNETIALAELKLSLYQEAL
AHLPSRSGGEKEVLILGMMTTGLNIWDDKTAAKKWESLPQKYGVAPDGSFELWRARVGWE
MGRVGSCTVDRMRDVFVEKLGGLSRGLVGVEEGDERGEVCRQIVYVFLRLTKLLFEAGYT
ERAVASWQALLEMTFCRPGTATSAEGFEEFWESEVARFGEEGARGWRCFVESGGDELPPD
PRFEDKRDGVDVEDYKDPYQLWAAVEMKRAARTRMPARTLDEGVDEDPFRVVMWGDIKDF
VVWFPAGVLDTAKKLVVEAFGVFVGIPSSCEEPFVKDWRRDPFLAPKSQAFRPWERRKGQ
NTESVDVDLSKRPPEFAQQGGDMATSPELLFTREGWFKCLDSWDKTHPPEETQLDLPWVL
ATLERLVTDHHREDLAEIYLATVWLNTDAKTTKKVAKTLLKQYTTNTPLYNAYALLEHSN
NNPELAFKILDSATNLPNSQLLFNTQTWLHLLSSRNDLALTTLCRSVDPSVSSPPSPATL
LKARSQFSTTLDFSLSSLSLPTAAAHAESLLLLAYLSPSSPPSEPTSSSQGNISSALGAI
TDITQKFTSRSLESTPCLEKLLQTACRLSHHHSQIGPYRPALFCSTVLSYLELFPSNTIF
LELLSWAQPPLLVKDPVRELLQTIALQPGHDSPSTRRFAIMHEVHNGSAHSVKKAFESAI
TGSGKGNGEIWRGFVRFCASRKEGKGVFYRGVEGCCLDRGLYLAAFEEGW
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaaaagaggagcagaaacggcaacgcgccgtgcccaagttcggatccttccag
ccgaaacccacacccgagcccgaagcagggcccgcatcgggggaggcgcggaaatctgtc
agagaccggcacggggaccccggtggggaatccaaaagggggcatgatggccgtcaccgt
gagagacgccgtgattctcggaatcggggagatgaacgtcgtcgggatcgtgagagggac
ggggacagaagacgaagtgggagcagggatggggatggggagaaagaacgggacaggcac
cgtgagagagaccgagatcgagacaggaaaaggcccaaagacagggagcagcaccattgg
tcaagagaggattcggtccagcccaagactctcagcgacaacttcttcattgacaaaaaa
ggcgaccctctcatcctccgctacagcggcaacgaccgctccaagatcccagcctaccac
cgctctggccatggcaaaatcctagggtcaagaggccatctcatcctccaccgtgacggc
cccagagatttattttctctctccttctcccgcgagggtctgggttcggccttcagggac
aaagccctcctctcacaaatccgacgcgccaaatctcaccggatcaggtcctccaccaaa
ccacctccctcaccaacagaccagttcatctctttgacacccccctcctccaaaaagcga
aaacgcggccgggaaagcccctcatcatcagacccggaggatcaacaggaccgaaagcca
gactacaggtctatttacggcaaggccaaacctcccccatcagactccgagtctgagtct
tcagattcggagacctcatccccagaacaagagaaaaaagagctttcttctgccagaaaa
gaatccgtcagcctcacccgccacctccgctcctcacccgccgacatcccctcctggctc
cggctgatctccctgcaagacaccctctttgcccaagacgttggccattcccgtccccgg
acaggcaatgaaaccatcgcccttgccgagttgaagctgtcgctttatcaggaagcgctt
gcccatctgccatctcgatctggtggtgaaaaggaggttctgatcctaggcatgatgacc
acggggcttaacatatgggatgacaaaaccgctgcgaaaaagtgggagagtcttccgcaa
aagtatggcgtagcaccggacgggagctttgagctgtggcgcgcgagggtgggttgggag
atggggagggtggggtcgtgtacggtggacaggatgagggatgtgtttgttgagaagctg
gggggtttgtcaagggggttggttggggtggaggagggggatgaaaggggggaggtgtgc
cggcagattgtctatgtctttttacgcctgacaaagctgttgttcgaggctgggtatacc
gagcgggcggtggcttcttggcaggcgttgttggagatgacgttttgccggcccggcacg
gcgacatcggcggaggggtttgaagagttttgggagagtgaagttgcgaggtttggggag
gagggggcgagggggtggaggtgttttgttgagagtgggggggatgagttgccgcctgat
ccaaggtttgaggacaaaagggatggggttgatgttgaggattataaagatccgtaccag
ctctgggcggctgtggaaatgaagcgggctgcgaggacgaggatgccggcgaggacgctg
gatgagggggttgatgaggatccgtttagggtggtgatgtggggggatatcaaggacttt
gtcgtctggttcccggccggggttttggacactgcgaagaaattggtggtggaggcgttt
ggggtgtttgttgggattccctccagttgtgaggaaccgtttgtgaaggactggcggcga
gatccattcttggctcccaaaagccaggctttccggccttgggagagacgcaagggacaa
aacacggagagcgtggatgttgatctgtcaaaacgcccccctgaattcgctcaacaaggc
ggtgacatggccacctcacccgagcttctcttcaccagggagggctggttcaaatgcctg
gactcctgggacaaaacccacccccctgaagaaacccaactcgacctcccatgggtgcta
gccacactcgaacgactagtcacagaccaccaccgtgaagacctagcagaaatctacctc
gccacggtctggctcaacaccgacgccaaaaccaccaaaaaggttgccaaaactctgctc
aagcaatacaccaccaacacccccctctacaacgcctacgccttgttggagcactccaac
aacaacccggaactcgctttcaaaatcctcgactcagccaccaacctccccaacagccag
ctcctgttcaacacccaaacctggctccacctcctctcctcccgcaacgacctcgccctg
acgaccctctgccgctcagtcgacccctccgtctcctctcccccatccccagcaacgctc
ctcaaagctcggtctcaattctctactaccctcgacttttccctttcttccctctccctc
cccaccgccgccgcccacgcggagagtctcctcttactagcctacctctccccttcctct
cctcctagtgaaccaacctcgtcctcccaaggcaacatctcatcagccctgggtgcaatc
acagatataacccagaaattcacctcccgctctttagaatccaccccctgtttggaaaag
ctcctgcaaaccgcctgcaggctgtcacaccaccactcccagatagggccttaccgcccg
gcgcttttctgttcaactgtcctctcttacctggagctcttcccttccaacaccatcttc
ctcgaactcctatcctgggcacaaccccccctgttggtcaaggatccagtcagggagctt
ctccaaaccatcgccctccaacctggacatgactcccccagcacccggcggtttgccatc
atgcatgaagtccacaacgggagtgcccactcggttaaaaaagcttttgaatctgccatc
acggggagcgggaaagggaatggggagatctggaggggttttgttcgtttctgtgcgagc
aggaaggagggaaaaggggtgttttaccggggtgtggaggggtgttgtttggataggggg
ttgtatcttgctgcttttgaggagggatggtga
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