Podospora pseudoanserina: QC764_711520
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Entry
QC764_711520 CDS
T09816
Symbol
NIP1
Name
(RefSeq) Translation initiation factor 3 subunit c
KO
K03252
translation initiation factor 3 subunit C
Organism
ppsa
Podospora pseudoanserina
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ppsa03012
]
QC764_711520 (NIP1)
Translation factors [BR:
ppsa03012
]
Eukaryotic type
Initiation factors
eIF-3
QC764_711520 (NIP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
NNF2_middle
Retrotransp-rel
Motif
Other DBs
NCBI-GeneID:
87971638
NCBI-ProteinID:
XP_062796815
UniProt:
A0ABR0HLP5
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Position
7
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AA seq
865 aa
AA seq
DB search
MSRFFRGGDDSSSESSSEEEELYSTSEDEEEQEEQEESSEEEEEDEESSSDDEAGPAKKG
LSRFLLDQASSDSEESEEEGTTKVKSAKDKRHDELEATISLIQNGQKINDWGSIANEFDK
LNRQVVKLQDGGKAPKSYIKCIAELEEFMNETLAKQKVTPKKMNATNARGLNAVKQRVKK
NNKDYQSQIDAFRKDSDAFMESDDEVAPPPKPSADKLRVKETYIPEAADEDEDKGFARVD
KRGKAMPFSPESILKHLRAILESRGRKNTDRIEQIKIMEELSKVANTPYLKIRVLQALVS
ARYDLGAGAGNVMPLEHWKAAEKELFALLKILETEKDHVVIENAEEWDDDDKQPTLAAGE
SYIKIPGSIVSYIERLDDELTRSLQAIDPHTSEYIERLTDEGSLYNIVLQGLLYYETIRK
DASLEVPQESLNRIMQRRLDHVYFKPAQVIKILEESAWKQVSAGVDSAITPRNKSEDASQ
LVNVLCNYLFEHSEGIIRARAMLCQVYFLALHDEYYKARDMMLTSHLQESISNFDIATQI
LYNRTLVQVGLCAFRKGLVYDAQNTLQEICGSGRQKELLAQGVMIQRFNQVSPEQERLEK
QRQLPFHMHINLELLECVYLTCSMLLEIPLLAQTGSSPDIKKRVISKTYRRMLEYHERQI
FTGPPENTRDHVMQASKALAAGEWKKATHFIHSIKIWELMPSAEDIKTMLAKQIQEEGLR
TYLFTYAPFYDTLAISTLSAMFELDSRKVAAVVSKMISHEELAAALDQVTETVIFRKGVE
LSRLQSLALALSDKASSLIETNERTLEQRTQGSANAFSRKDGQRGGQRGGGQRGGRGGAR
TGGNAQRQAGGTQFTGGALGAAVRG
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcttcttccgcggcggtgacgacagctcgagcgagagcagctctgaggaggag
gagctgtactccacttccgaggacgaggaggagcaggaggagcaggaggagtcttctgag
gaggaggaggaggatgaggagtcctccagcgacgatgaggccggtcctgccaagaagggt
ctgtctcgcttcttgcttgaccaagcatcatccgacagcgaagagagcgaggaggagggg
acaacaaaggtcaagagcgccaaggacaagagacatgacgaactcgaggcgaccatctcc
cttattcagaacggccagaagatcaatgactggggctctattgcgaatgaattcgacaag
ctcaaccgtcaagtcgtcaagctccaggatggcggcaaggcgccgaagagctacatcaag
tgcattgcggagttggaggagtttatgaatgagacccttgccaagcagaaggtcacaccc
aagaagatgaacgccaccaacgcccgtggtctcaacgccgtgaagcaacgcgtcaagaag
aacaacaaggattaccagagccagatcgatgctttccgaaaagacagcgatgccttcatg
gaatccgatgacgaggtcgcccccccacccaaaccatccgccgacaagctgcgtgtgaag
gaaacttatattcccgaggcggctgatgaggatgaagacaagggctttgcccgggtcgac
aagcgtggaaaggccatgcccttctctccagagagcatcctcaagcatctccgcgccatt
ctagagtcaagaggcaggaagaacaccgatcgtatcgagcaaatcaagatcatggaggag
ctcagcaaggtggccaacaccccctacctcaagatcagagttctccaggctcttgtatct
gcccggtatgatctcggcgctggtgccggaaatgtgatgccccttgagcactggaaggcg
gctgagaaggagctgtttgccttgctcaagattctcgagaccgagaaggatcacgttgtg
attgagaatgctgaggagtgggatgatgatgacaagcaaccaacccttgccgctggtgag
agctatatcaagatccccggcagcatcgtgtcgtatatcgagcgtcttgatgatgagctc
acccgctcccttcaggccatcgaccctcacacgtctgaatacattgagcggttgaccgac
gagggttctctgtacaacattgttctgcaaggtctcctgtactacgagaccatccgcaaa
gacgcctcgctcgaagttccccaggagagtctgaacagaatcatgcaaagacgcctggat
catgtgtacttcaagccagctcaagtcatcaaaatcttagaagagagcgcctggaagcag
gtctctgcgggcgtcgactccgccatcacgccccgtaataagtcggaggatgccagccaa
ctcgtcaacgtcctttgcaactaccttttcgagcacagcgaaggcattatccgtgcccgc
gccatgctctgccaggtctacttcttggcgttgcacgatgagtactacaaggcccgtgac
atgatgctcacatctcacttgcaggagagcatttccaacttcgacattgccacccaaatt
ctctacaaccgtacccttgttcaagttggtctctgcgccttccgcaagggtctcgtgtat
gacgcccaaaacactctccaagagatttgcggcagcgggcgccaaaaggagcttcttgcc
cagggtgtcatgattcagcgcttcaaccaagtttctcccgagcaagagcgccttgagaaa
caacggcagctacccttccacatgcacatcaaccttgagctcttggagtgtgtgtacttg
acctgcagcatgcttcttgagatcccgctgttggctcagactggttcgtctcccgatatc
aagaagcgcgtcatcagcaagacatatcgccgtatgctcgagtaccatgagcgccaaatc
tttaccggccctcctgagaacacccgcgaccacgtcatgcaggcgtccaaggccctcgcg
gctggtgagtggaagaaggctacgcacttcatccacagcatcaagatctgggagctcatg
ccaagcgccgaggacatcaagacgatgctcgctaagcagattcaggaggagggtctgcgc
acttacctgttcacatatgcgcccttctacgacacactggccatttccacattgagcgcc
atgtttgagctcgactccaggaaggtggctgccgttgtcagcaagatgatcagccacgag
gagctcgcggctgccctcgatcaggtcaccgagaccgtcatcttccgcaagggcgtggag
ctcagccgtctgcagagcttggccctggctctctcagacaaggcgagctcgctcatcgag
accaacgagcgcacactggagcagcggacacaaggatcggccaatgccttcagcaggaag
gatggtcaacgaggtggtcagcggggcggtggccaacggggtggcagaggcggggcgcgg
actggaggaaacgctcagcgacaggctggtggcacccagtttacgggtggtgctctgggt
gctgcggtccgcggttaa
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