Paenibacillus psychroresistens: EHS13_01270
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Entry
EHS13_01270 CDS
T06328
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHS13_01270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_01270
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_01270
Enzymes [BR:
ppsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHS13_01270
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHS13_01270
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHS13_01270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QGQ93644
UniProt:
A0A6B8RCZ7
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All DBs
Position
258626..259570
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETLALNEEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVNSVQIDG
VLHEFSTVPGVMEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGDGRITAGDIRADSDVEI
LNPELHIATLSPDARLHMRIFASRGRGYVQSDKNKREDQPIGVIPIDSIYTPITRVNYSV
ENTRVGQVTNYDKLTMEVWTDGSIRPEESVSLGAKILTEHLNLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRAED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatcgaaaaacccaaaatagaaaccttagcactaaatgaagaaggaacctac
ggtaagttcgttgtagagccacttgaacgtggctatggcactacactcggaaactcctta
cgcagaattctactttcatcattgcccggggcagcagtaaattccgtacagatcgatggc
gtattgcatgagttttcaactgtacctggcgttatggaggatgtaacagaaatcatcctt
aatctcaaagggctttcgttgaaaattcattcagatgaagaaaaagtgcttgaaattgat
gctgaaggcgacggtagaattactgctggcgacattcgtgctgatagcgatgttgaaatc
ctcaatcctgagcttcacattgccacactttccccagatgctcgtttgcatatgcgtatt
tttgcaagcagaggtcgcggttatgtacagtctgataagaataaacgtgaagatcaaccc
attggagttattccaattgattccatctacacgccaatcactcgtgtgaactacagcgta
gaaaatacacgtgtgggtcaagttaccaactatgataagttgactatggaagtatggact
gatggaagcatacgtcctgaagaatccgttagccttggtgctaaaattcttacagagcac
ttgaacttgttcgttggattaacggatgaagcgaaagatgcagaaatcatggttgaaaaa
gaagaagacaagaaggaaaaagtattggaaatgacaattgaagaattggatctttccgta
cgttcgtataattgtcttaaacgtgcaggaatcaacaccgttcaagagctaatcacgaaa
acagaagaagatatgatgaaggtacgtaacctgggtcgtaaatctttggaagaagttcaa
gagaagctggaagaattgggattgggacttcgcgcggaagattag
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