Paenibacillus psychroresistens: EHS13_04110
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Entry
EHS13_04110 CDS
T06328
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_04110
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHS13_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_24
PhyR_sigma2
Sigma70_ECF
Xre-like-HTH
GerE
HTH_10
DUF4746
Motif
Other DBs
NCBI-ProteinID:
QGQ94147
UniProt:
A0A6B8RDZ7
LinkDB
All DBs
Position
complement(869920..870459)
Genome browser
AA seq
179 aa
AA seq
DB search
MDLDYLEHMNTIEIPQLKDIMEFYGEDIWNYAYFITKNHSLADDIAQEVFFKAYKHIATF
RGGSSLKTWLLKITRNTALSFLKLAFVRKVSLVGFIFNSGTSPSPESQFFAQFQLDEMWS
IVMSLPIKFREVLILHAHYELSMEEISSTLDISIGTVKSRLNRARSKSIKQLKEREIYE
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggacttggattatctggagcatatgaacacaatcgaaataccgcagctaaaagatatc
atggagttctatggggaggatatttggaattacgcttattttattactaaaaatcactcg
cttgctgatgatattgctcaagaggtgttttttaaagcctacaagcatatagctaccttt
cgtggaggatccagcttaaagacatggctgctcaaaataacacgaaataccgcactctca
tttctgaagctcgcttttgtccgcaaggttagcttggtaggcttcattttcaatagtgga
acctcgccttcgccagaatcacagttttttgcgcaatttcagctggatgagatgtggagc
atcgtaatgagcttaccgattaaatttagagaagttctcatcttgcatgcacactacgaa
ttatctatggaagaaatttcaagcaccttggacatatctattgggaccgttaagtctcgc
ttaaatcgcgcccgctccaaatcaataaagcaattaaaggagagagaaatctatgaataa
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integrated database retrieval system
