Paenibacillus psychroresistens: EHS13_12895
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Entry
EHS13_12895 CDS
T06328
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_12895 (addB)
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHS13_12895 (addB)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EHS13_12895 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UPF0179
Motif
Other DBs
NCBI-ProteinID:
QGQ95714
UniProt:
A0A6B8RIZ6
LinkDB
All DBs
Position
2888477..2892070
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AA seq
1197 aa
AA seq
DB search
MAIRFIIGRAGSGKSRRCLDEIRQQLADNPQGNPLILLVPEQATFQAEVALVSTPGLSGI
IRAQVLSFRRLAWRVMQETGDTAKLPIDDIGKIMLLQRILHKHDAELKLFQSSQEKMGFL
ERLNAFFSELKRYCITADVLKDYYAKKIISKEIEGSTSLLADKLHDLLVLYSEFEKLLAL
QYLDGEDYLANLAKQLQKSTGVCEADLWIDGFFGFTPQEQEAVLQCMRYCRSVTITLCLD
RAYSVGERPDELNLFHPTAVTMVRLQEQLEALGMFTNEVVVLGENELPRFRKSPMLAHLE
RNYEQRLSPRRKHYPAVAEEALNESIHLYAAVHRRAEVEGAAREIRRVVREKHLRWRDIA
VRVRNIEAYGDLLASVFDDYSIPYFFDQKSTMMFHPLVEFIRSALEVVLHNWQSDAVFRC
VKTDFLLPLNKESSGIVDRKAMDELENYVLAYGIQGYRWLEAKSWEIRRFNSLEDEEATA
KDEDTLALKRIQASSQLIIKPLSQLQQRMKQSETLQQRTEALYTMLSDSGVPERLQQWGD
EALAAGNPQKAREHSQVWDHVMNMLDQMVEMMGAEEVSLELFVQLLDAGLESIRLALVPP
SLDQILIGSIDRTRTAQVKIAFVLGVNDGVLPQRMNEDGLISENERELLSELGLHLADGS
RRKLLDEQFLIYTVLCAPSDYLWLSYPLADEEGKSLLPSEIIKQVKSLFPLMQERLLLAG
PEGSLSEQAQMSFIAQPERALSYLTVQMKLALRGAEIAPLWWHIYNWFAVQADWRDKLQR
MMRSLLFTNSEPALAETTRVQLYGDHLRASVSRMERFVACPFSQFVSHGLRLQERRIYRL
EAPDIGQLYHAALNALVKDMQQEGVLWGMLSLEQLTERASLIIDRLTPRLQSEILLSSAR
YRYIAFKLKNIIGRAAVMLAEHVRRGAFVPVELELGFGPGQTLPALSFQLNNGFAMDIIG
RIDRVDRAEGAEGALLRIIDYKSSSTSLKLAEVYHGLSLQMLTYLDVVITHAERWIGQKA
IPAGVLYFHVHNPMIQSKNALQSEEVEKELKKRFKTRGLVLAETEAIGFMDHDLSGGSGR
SSIIPVALKNDGSFYKNASVATRAEWSLLQSHVRQTIRVIGTRITNGEVSVEPYRMGEQI
ACTFCNYKSICEFDPLFAGNDYRIIQPRSNEQVWQAMALDIAGESVMDIPLKQKGVQ
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgatttataataggacgagctggcagcggcaaaagcagacgttgtttggat
gagattcgtcagcagctagctgataatccgcaagggaatccactcattctgcttgtacct
gagcaagcaacctttcaagctgaggttgccttggtttcaacacctggtttaagtggaatt
atccgagctcaggtgctaagttttcggcggctagcatggcgagttatgcaggaaacaggt
gatacagctaagcttcccatagatgatataggcaaaataatgctattacagcgtatttta
cataaacatgatgcagaattgaagctgtttcaaagctcacaggaaaaaatgggctttctc
gagcgattgaatgctttttttagtgagttaaaacgttattgtataacggcagatgtctta
aaggattactatgcaaaaaaaataatctcaaaagagatcgagggaagtacctctttatta
gctgataaattacatgatttgttggttctttattcagagtttgaaaagctgctagccctg
caatatttagatggtgaagactacttagccaatttagctaaacaattgcagaaaagcact
ggtgtttgtgaggctgatttatggattgacggcttttttggttttactcctcaagagcag
gaagcggtgctgcaatgtatgcggtattgtcgcagtgtgacgataaccttatgcttggat
cgcgcttattcggttggtgagcggccagatgaattgaatttatttcatcccacggccgtt
actatggtgcggctgcaggagcagctagaagctttagggatgtttaccaatgaagttgta
gttcttggtgagaacgagctgccgcgtttcaggaagagccccatgctggcacatttggag
cgtaattatgagcagcgtctatctccgcgaaggaagcattatccagctgtagctgaggaa
gctctaaatgaatctattcatttgtatgcagctgtacatcgcagagcagaagtagaagga
gcagctcgagaaatacgccgtgttgtgcgagagaagcatttaagatggagagatattgca
gttcgggttaggaacattgaagcttatggagacttactagcttccgtatttgatgactat
agtattccgtacttctttgatcagaagagtacgatgatgttccatccgctagttgaattt
ataaggtcagcgctcgaggttgtcttgcataattggcaatcggatgctgtttttcgttgt
gtaaaaacggattttttattgccgctaaataaagaatcatctggcattgtagatcgtaaa
gctatggatgagcttgaaaattacgtgctagcatatggaattcaaggctatcgctggcta
gaagcgaagagctgggaaattcgacgattcaattcgttagaggatgaggaagcaacagct
aaagatgaggatacattggccttgaagcggatccaagccagcagccaattgattattaag
cctctatcccagctgcagcaacggatgaaacagtcagagactttgcagcaacggacggaa
gctttatatacaatgctcagcgattctggagttccagaaagattgcagcaatggggagat
gaagctttagctgcaggtaatccgcaaaaagcacgtgaacatagccaggtctgggatcat
gtgatgaatatgctggatcagatggtggaaatgatgggggctgaagaggtttctctagag
ctttttgtccaattattagatgccggattagaaagcattcgtttggctcttgtcccacct
tcactagatcaaatcttaattggaagcattgatcgaactcgtacagcccaggttaagatc
gcttttgtcttaggtgtgaatgatggggttctaccccaaagaatgaatgaagatggcttg
atctctgagaatgaacgcgagcttttatcggagctgggcttacatttggcggatggaagt
cgtcgcaagcttttggatgaacaatttttaatttataccgttttgtgtgcaccttcggat
tatttgtggttaagttatccgttggctgatgaggagggaaaatctttattgccctctgaa
atcatcaagcaagtgaaatcattattcccactaatgcaggaacgcttacttttagccgga
cctgaaggatcattatcggagcaagcgcaaatgagctttatcgctcagccggaacgggct
ttatcatatttaaccgtacagatgaagttggcgctgcgtggagctgagattgccccatta
tggtggcatatctataattggtttgccgttcaagcagattggcgggataagctgcagcgc
atgatgcgatcgttgctgtttactaattctgaaccagctttagccgaaacaacgcgagta
cagttatatggagatcatttaagggccagtgtttcacgcatggagcgcttcgtggcatgt
ccattttcacagtttgtctctcatggcttgcgcttgcaggaacgacggatttatcgctta
gaagcgccagatatcgggcaattatatcacgcagctttaaatgcattagtcaaagatatg
cagcaggaaggcgttctttggggaatgctgagcttggagcaattaacggaaagggcatcg
ttgatcattgatcggttgacccctaggctgcaaagcgaaatcctattaagctctgcgaga
taccgctatattgcctttaaattaaaaaatattattggtcgagcagccgtaatgttagca
gagcatgttagacgaggagcttttgtacctgttgagctagagcttggttttggaccgggg
caaacattgcctgccttaagctttcaattaaataatggctttgccatggatattattgga
cggattgaccgtgtggatcgtgcagagggtgcagagggtgcattattaaggattattgac
tataaatcaagctcaacctctttaaaattagctgaagtatatcatggactttccttgcaa
atgctgacttatctggatgtggtcatcacacatgctgaacgatggattggacagaaagca
attccggcaggcgtgctttattttcatgtgcataacccaatgattcaaagcaaaaatgca
ctgcaaagcgaagaagtggaaaaagagctgaagaaacgttttaaaacacgtggacttgta
ttggctgaaacagaagccattggattcatggatcatgacctaagtggaggaagcgggcgt
tcaagtattatcccggttgctttgaaaaatgatggaagcttctataaaaatgcatccgta
gctacacgagcagagtggagcttgctgcaaagccatgtaaggcaaactattcgtgtaatc
ggaacaaggatcacaaatggtgaggtatccgtagaaccttatcgaatgggcgagcagatt
gcttgcaccttttgtaattataaatcaatttgtgaatttgaccccttattcgcaggaaat
gactatcggataattcagcctcgaagcaatgagcaggtatggcaagcaatggcgcttgat
attgctggtgaatccgtaatggacattccactgaagcagaaaggagtgcagtag
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integrated database retrieval system
