Paenibacillus psychroresistens: EHS13_12900
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Entry
EHS13_12900 CDS
T06328
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_12900 (addA)
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHS13_12900 (addA)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EHS13_12900 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_22
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGR00068
UniProt:
A0A6B8RVX0
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All DBs
Position
2892075..2895986
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AA seq
1303 aa
AA seq
DB search
MDQASKPIDSTWTDDQWEAISLRGSNILVAAAAGSGKTAVLVERIIRQISDVHNPLDVDR
LLVATFTKAAAAEMRHRIGEALEKALFAQPESQHLRRQLALIHRASITTLHSFCMEVIQR
YFQMVQLDPGFRIANETEAALLRHDQLQDLLEECYGENLDEQVNGFWLLVEWFSGERNDD
ALMALIEQLYDSSRSHPDPAKWLLEKAARFNSGANGSSEDEEPWLRSLTHDVHLELNGVE
GLLLEAIRIVEQPGGPLPYMDNLEGELSLIRYLQELSAETNQKTWHQIWGDLYEAFQTTG
FGRLNPCKGDTYDKGLQENVKQLRDRAKDQFSKLKVELFGRSLEQFSAELTEMAPLMQVL
VDLVLRFGERYMQAKIAKGLLDFADLEHYCLQILRDPASTGDELLPSRAALDYQEQFVEV
LLDEYQDTNRVQEAIIDLISRKNPGNRFIVGDVKQSIYRFRLAEPGLFLEKYKSYQKTLG
GAGRRIDLAANFRSRREVVDGVNYIFKQVMNESVGEVAYDRSAELVYGAGYPESEAGIKE
LSAEEKFAIELLLIDRSGESSESSEDDAESQEGGKSSDAEEDEGPTAGGTVRDDTQELKT
AEMEARLIALHIRRLMGMDGQPAFQVWDKKAGGMRPIAYRDIVILLRATRNWAPTLMEEL
RLQTIPAYADLNTGYFTAMEIEVVISLLQIIDNPMQDIPLAAVLRSPIVGLTADELATIR
LAQKQGSFYLALLQYVEQIGTSETAEQTLSEKLISFIATLEVWREDAKQGALADLIWGIY
RTTGFYDFVGGMPGGVQRQANLRALYDRARQYEATSFRGLFRFLRFIERMQDSGGDLGTA
RALGEQEDVVRIISIHKSKGLEFPVVFVAGLAKMFNQQDLNSTFLLHKELGFGPKYVDTK
LRVSYPSLPYLAIRRRMRLEMLAEEMRVLYVAMTRAREKLYLVGTVRNLDKQLLQWGRQL
PHKAIELPDYELAKARCYLDWIGPSLIRHPHAESLRVRGGFEKQSSNGTLLNEMPSHWKV
VLAQPELFVAQAAAASEAVVEQQQHKEALLNLTPIPLVADELSSEIEERLSWKYSYEMAS
QLLSKTSVTELKRLGDSQGSAEFSEETRSADRRLSFRRPRFIEQQQLNAAERGTVYHAVM
QQLPINAGLTLADIQGTLDRMLGLQMITSMQYNSVDVKVIHGFFGTDLGHRLLNAKQVLR
ETPFSYGLQASEIYPFAPEAIQDEMVLIQGVIDCLFEDEQGLILLDYKTDAVRTPDIPLL
AEKYRVQLELYAKAVEQIWKKPVTQTYLFYFDGAHLIELTAKR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagcctcaaaaccaatagatagcacttggacggacgatcagtgggaagcgatc
tctttgcgcggcagcaatattctcgtcgcagcagcagcgggctcaggtaaaacggccgtt
ttggtcgaacgtatcattcgccaaatatcggatgtccataatccgcttgacgtcgatcgt
ctgctagtcgcaacattcactaaggcagcggcagcagaaatgcggcatcggattggagaa
gctctagagaaagctttatttgcccaaccggaatcgcagcatctacgtcgtcaattagca
ctcattcaccgtgcatccattacaaccttgcactccttttgcatggaggtgatccagcgc
tattttcaaatggttcagctggatcctggcttcagaatcgcgaatgagacagaagcggct
ttgctgcggcacgatcagctacaggatttgctcgaggagtgctacggtgaaaacttggat
gaacaagtaaatgggttttggttgctggttgaatggtttagcggagagcgtaatgatgat
gctttaatggctttgattgaacaactctatgattcctcgagaagccaccctgatcctgct
aaatggttgctggaaaaagcagcccgttttaatagtggggcgaacggaagctctgaagat
gaggaaccgtggcttcgcagtttaactcatgatgtccatctggagttaaatggagtagaa
ggcttattgcttgaagctattcggatagtagagcagcctggaggtccgttgccttatatg
gacaatctagaaggtgaacttagtcttattcgttatttgcaggagctgtcagctgaaaca
aatcaaaaaacatggcatcaaatatggggagatttgtacgaggcttttcaaacaactggc
tttggacgtctaaatccttgcaaaggcgacacttatgacaaaggattacaagagaatgtg
aagcagctgcgggacagagcaaaagatcagtttagtaagctcaaggtagagctgtttgga
cgctctttagaacaattttcggctgaattaaccgaaatggcacctttgatgcaagtttta
gtagatttagtgttacgttttggagaacgctatatgcaggccaaaatagctaaggggttg
ctggattttgctgatttagagcattattgcttgcaaattttacgtgatccggctagcaca
ggcgatgaattattgccatctcgtgcagctctagactatcaagagcagtttgtcgaagtg
ctgctggatgaatatcaggataccaatcgcgtacaagaagctattattgatctcatttcc
cgtaaaaatccagggaacaggttcattgttggggacgtcaaacaaagcatttaccgcttt
cgtttggcggagccagggctttttctagagaaatataaaagctatcaaaagacgcttggc
ggtgctggcagaagaattgatttggcagctaattttcgcagtcgacgtgaagtggtggac
ggggttaattatatttttaaacaggtaatgaatgaatctgttggagaagttgcttatgat
cgcagtgctgagttagtttatggtgcaggttatcccgagagtgaagcaggtattaaagag
ctaagtgctgaagaaaagtttgcaattgagctgttgttaattgatagatctggagagtct
tctgaatcgagcgaggatgatgcagaatctcaagagggtggtaagtcctcggatgccgaa
gaagatgaggggccaactgcaggtggtactgtacgcgatgatacacaagaactgaaaact
gctgaaatggaagcccgcttaattgccctgcatattcggcggcttatgggaatggatggt
caacccgcttttcaggtttgggataagaaagcaggcgggatgaggccgattgcttatcga
gatatcgttattttgctgcgtgctacaaggaattgggctcctactctgatggaagaattg
cggttgcaaactatccctgcttatgcagatttgaatacgggctattttacagctatggaa
attgaagttgtgatatccctgctgcagattatcgacaaccccatgcaggatattcctttg
gctgctgtactgcgttcgccgattgttggattgactgcggatgagcttgcaacaattcgc
ttggcacagaaacaggggagcttttatctagctcttctacagtatgtagagcagattggc
acttccgaaacagctgagcaaaccttaagtgaaaagcttatttcttttatagcaacactt
gaagtctggcgagaggatgctaaacaaggcgcgctagcggatttaatttgggggatttac
cgcactacaggattttatgatttcgtcggtggaatgcctggaggagtgcagcgccaagcc
aatttaagagccttgtacgatcgtgctcggcaatatgaagctacttcctttcgcggattg
tttcgtttcttgcgttttatcgaacggatgcaggacagtggtggagatttaggaacagca
agagctttgggtgaacaagaggatgtggtgagaatcatatcgattcataaaagcaaaggt
ttggagtttccagtcgtctttgttgcaggtttagcaaaaatgttcaatcagcaggattta
aacagtacatttttgctccataaagagcttggatttggtcccaaatatgtggacaccaag
ctgcgtgtcagttatccatcattgccttatttggctattcgccggaggatgcgtttggag
atgctggctgaagaaatgcgtgtgctttatgttgcaatgacacgtgctcgggagaagctc
tacttggttggaactgttcgtaatttggacaagcaattactgcaatggggacgtcaattg
ccccataaagctattgagttaccagactatgagctagcgaaagctcgttgttatttggat
tggattggaccttccttgattcgccatcctcatgcagaatcacttcgtgtcagaggtggg
tttgaaaagcagtcaagcaatggaaccttgttgaacgaaatgccttctcattggaaagta
gtcctggcacagccagaattattcgttgcacaagctgctgcggcaagtgaagctgtggtc
gagcagcaacagcataaagaggcgttgcttaatcttactccgattccattggtagcagat
gagcttagttcagagattgaagagcggttatcttggaagtattcttatgaaatggcttcg
caattgctttccaaaacatcggtaacggagctaaagcgcttaggcgattctcaaggttct
gcagaattcagtgaggaaactcgttcagctgatcgccgcttgtcattccgccgtccacgg
tttattgaacagcagcagttgaatgctgccgagcgagggaccgtatatcatgctgtaatg
cagcagcttccgattaatgcaggattaacactagctgatattcaaggtaccttagaccgg
atgctggggcttcaaatgattacgtccatgcaatataattctgtagatgtgaaagtaatc
catggattttttggtacagatctaggtcatagattacttaatgctaagcaagttttaaga
gaaaccccttttagctatggtttgcaggctagtgaaatttacccttttgctcctgaagca
attcaggatgaaatggttttgattcaaggtgttattgattgtttgtttgaggatgaacaa
ggtttaattctcttggattataaaaccgatgctgtccgtacaccagatatcccgctttta
gcagagaagtatcgggtacagcttgagctgtacgctaaagcggttgaacagatatggaaa
aagccggtgacacaaacctatttattttatttcgatggtgctcatttgattgaattgact
gcgaagagatga
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