Paenibacillus psychroresistens: EHS13_12915
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Entry
EHS13_12915 CDS
T06328
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_12915
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHS13_12915
Archaeal homologous recombinant proteins
EHS13_12915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QGQ95717
UniProt:
A0A6B8RIK4
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All DBs
Position
2898684..2902136
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AA seq
1150 aa
AA seq
DB search
MKPIQLTWAGLQSYREKQEIDFTLLCDAGVFGIFGPTGSGKSTILDAITLALYGKVERAS
NGTQGILNQYENNLSVSFTFELSHAEGSKKYRVERQFKRAADVSVTNTICRLIHIQAEQE
SIVIADKAGEVNAQIHQILGLSMQDFSRAVILPQGKFAEFLSLKGSDRRQMLQRLFHLEH
YGDVLTAKVSQRTKETDISIKQILAEQQGLGDASEQALQSTKLLLEEADNTAKQKRIELQ
QVLQLWEEIKQTRALQQTQQELEANKFSLLIEEPRIVEQEQQLKLADQAERVRHFLQQFE
DTDRLAKKLILEQDEIAKQHIEVTNQTESIVQQHILAKSELSLQDAPLQVKLEQLKQAVR
LEQEIEKGLLQENELADKLELCKAQMVLYQEELLKKQDTHTRAIKKRDDLQEQLKSLEIK
SEYRQNLQNALRDKHALDSTESKVIELEQQMSTKQQQLNTEKLREAEVTSLLKNNQAGLT
TLMHAIKRNTFNHLQTEADLEALKINTTSAIEKIKSTAKSAEIAHYALHLADQLKELQPC
PVCGSTEHPTPIKELNRESASMITSETELERHDLLLTKVLKLQFNQERQAMQYQALEQKL
VESLAFTNNGETAEAEVAAAMPLTNQTPEVLDSIELLEMEHERLSEQQILAAQQITQISD
ELKIALQKKDRIMQHQIEISAQIQAIQTMYVTLEEQLLNSKSSHKQLLEQWQSVYTSFTL
ENIQLETSKLNQQDLAAEQLRVRVEQSIPFIEENLKETQQKIIQVAELEKSKIQLETEHR
GSQRLNLELKNQFMSRWEQEIKAGESIAGYIQETELLLKKLRESEQVAQQLMEKSQNELM
RINDKYITVRQAVDSAKMAFIKAEQFWQEALARTEFVTADDVKNAYLTSNQMEVWQQEVK
KHREQIASITAKLAELIIKLNGKSVSETVCLDSELMVAAAKEMDEKALQDRAKIERDLEQ
LQSKHMHWKELEQNLSKLKQEFADLSKLQSVLRGNAFVEYIAEEQLIQVCRIASQRLGQL
TRQRYALEVDSSGGFVIRDDANGGVRRPVSTLSGGETFLTSLALALALSAQIQLSGQYPL
EFFFLDEGFGTLDPELLETVVEALEKLHIDSLTVGIISHVPELRSRLPRKLIVESAEPGG
RGSRVYMEGL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgattcaactgacttgggctgggttgcaaagctatcgcgagaagcaggaaatt
gattttacacttctgtgtgatgcaggagtttttgggatatttggtccaacaggcagcgga
aagtcgacgattttggatgcaattacattagctttgtacggtaaagtagaacgtgcaagc
aatgggacgcaaggtattctcaatcaatatgagaataacctttctgtgagctttaccttt
gaattgtcgcatgccgaaggttccaagaaatatcgggtggagcgtcaatttaagcgagca
gctgatgtatctgtgacgaatactatctgtcgattgatacatatccaagctgagcaagaa
agcatagttatagctgataaggctggcgaagtaaatgctcaaattcaccaaattttaggg
ctttcgatgcaagatttctcgcgtgcagtgatacttcctcagggcaagtttgctgaattc
ctctcactgaaaggcagcgaccgtcgacaaatgctgcagcgcctgtttcatttagaacat
tacggtgatgtgttaacagccaaagtgagccagagaaccaaagaaacggatatatcgatt
aaacaaattttagccgagcaacaagggcttggtgatgcctcagagcaagcattacaatcg
actaagctgctattagaggaagcggacaatacggcgaagcagaaacggattgagctgcag
caagtattgcagctatgggaagaaatcaaacaaacccgagctttgcagcaaacgcagcaa
gagcttgaagctaataaattcagcctgcttattgaagaaccaagaatagttgagcaagag
cagcagttgaagttagctgatcaggcagaacgagtcaggcattttttacagcagtttgaa
gatacggatagactagcaaagaagcttatccttgaacaagatgaaatagctaagcagcac
attgaggtcacaaaccagaccgaaagcattgttcagcagcatattcttgccaagagcgag
ctatctcttcaggacgcacctctgcaggttaagttagagcagcttaagcaggctgtccgt
ttggaacaggaaatcgaaaaggggcttttacaagaaaatgagctagcagataagcttgag
ctttgcaaagctcagatggtgctttaccaggaagaattgctaaaaaaacaagatacccat
actcgagcaatcaaaaaacgagatgatctacaggagcagctaaagtcattagagatcaaa
tcggaataccgtcaaaacctgcaaaatgcgctacgcgataagcatgcattggattcaacc
gaatccaaagtaatagagcttgagcagcaaatgagtactaaacaacagcagctaaataca
gaaaaattgcgtgaagctgaagtaacttcattgttgaaaaacaatcaagcaggtttaact
acattaatgcatgctattaaaagaaatacattcaaccatttgcaaacagaggcagatttg
gaagccttaaaaataaacacgacaagtgccattgaaaaaataaaaagcacagcaaaatct
gctgaaatagcgcattatgctttgcatttagctgatcagcttaaggagctgcagccatgc
ccggtgtgtggatcaacagagcatccaacacctattaaggaattaaatagggaatcagct
tctatgattactagcgagactgagctagaacgtcatgatttgttgctaactaaagtatta
aagcttcagttcaatcaagaaagacaagctatgcagtatcaagcactagagcagaagcta
gtagaatcactcgcttttactaacaatggggaaactgcagaggctgaggttgctgcagcc
atgcccttaactaatcaaactccagaagtattggactctattgagctgctcgaaatggag
catgaacgtttatccgaacagcagatactagccgctcaacaaatcacccagatttcagat
gagttgaagatagctctgcagaaaaaagatcgcatcatgcagcatcaaatagagatttct
gcacaaatacaagctattcaaacgatgtacgtaactttagaggagcaattactcaattct
aaaagctcgcacaaacaattattggagcaatggcaatcggtatatacgtcatttacgctt
gagaacattcagttagaaactagcaagttaaatcaacaggatctggccgcggaacaattg
cgcgtacgggtggagcaaagtattccttttattgaagagaatttaaaagaaacacaacaa
aaaataatacaagtcgcagagctcgaaaaatcgaagattcaattagagaccgagcataga
ggctcgcaaaggttgaatttggaactgaaaaatcaatttatgtcccgttgggagcaagaa
ataaaagctggggaatctatagcagggtacattcaagaaacggaattactcttgaaaaag
cttcgtgaatcggagcaggtagcccagcagctaatggaaaaatcgcaaaatgaactgatg
cggataaacgacaaatatataaccgttcgccaagcagttgattcagctaagatggctttt
attaaagcggagcagttttggcaggaagctctagcgagaactgaattcgttactgcagat
gatgtgaaaaatgcgtatttgactagtaatcaaatggaagtttggcagcaagaagtgaaa
aaacatcgcgagcaaatagctagtataactgcaaagctcgcagaactgataattaagcta
aacggaaagtcagttagtgaaacggtatgcttggattcggagttaatggtggccgcagct
aaggaaatggacgaaaaagccttacaggatcgtgccaaaatcgaacgagatctcgagcag
ctgcaatccaagcacatgcattggaaggaattggaacaaaatttaagtaagctgaaacaa
gaatttgctgatttaagcaagctgcaaagtgtgctgcgtggaaatgcttttgttgagtat
attgcagaagaacaattgatccaggtatgtcggattgcttcacaaagactagggcagtta
accagacagcgatatgcgttagaggttgattcatctggtgggtttgtcattcgagatgat
gctaatggaggagttagaagaccggtaagtactttgtctggcggagaaacctttttaaca
tcgttagctttagcattggctctgtctgcacaaatccaattgagcggccagtatcctttg
gaattcttttttctagacgagggattcggaacacttgatcctgagttgttggaaacggtt
gtcgaagcattagaaaagctccatatagacagccttacagtgggtatcattagtcatgta
cctgagctgagatcacggcttccccgcaagctaattgttgaatctgctgaacctggaggt
agaggaagtcgagtatatatggaaggcttataa
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