Paenibacillus psychroresistens: EHS13_13590
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Entry
EHS13_13590 CDS
T06328
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_13590 (sbcD)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHS13_13590 (sbcD)
Archaeal homologous recombinant proteins
EHS13_13590 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QGQ95836
UniProt:
A0A6B8RK89
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Position
3039069..3040238
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AA seq
389 aa
AA seq
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MKIAHIADCHYGLGYPGPNHFSRFEDIIASMNYAADRIIEEGCKLVLFAGDAFKDARVFL
DRASLEITEFVSWLRKLSKAGIDVVVISGTPSHDAISAYFLIQQMNIPRIHVFTDPGHMI
LHDINISCLPGMNRSNIAANDEIRGLPAHEIHQIMTDRITEQCKELRSKCDAMYPTILMS
HLTFDLADTGFEDALLQNEPILLQEATELFDLVALGHIHRPQKAGLNVYYSGAPERHNFG
DEKTATGFWIHEIHPAEWVHTYVVNPKSRKFKTLRWCDMDIQAWLDGELDTFDGVNSSIV
RVHYSCSEELQKLFDRQTLEKALYSARAYFVYEIKADIERTDRARDVEVTEALGPLTALQ
KWATNQGIETPEIIMLQSMTSTLLEGVAP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcgcatattgcagattgtcactatggactaggttatcctggtccgaatcac
ttttctagatttgaagatatcattgcttctatgaattatgctgcagatcggattattgaa
gaaggttgtaaattagttctgttcgcgggagacgcattcaaggatgctcgagtgtttctg
gaccgtgccagtttagaaatcactgagtttgtttcttggttacgaaagttatctaaagca
gggattgatgttgttgttataagtggtaccccttcacatgatgcgattagtgcctatttt
ctcattcaacaaatgaatattccgcgtatccatgttttcaccgatccaggtcatatgatc
ttacatgatattaatatatcctgtttaccgggtatgaatcgcagcaatatagctgcaaat
gatgaaattcgcggtttaccagctcacgagattcaccaaattatgacggaccggataacg
gaacaatgcaaagagctccggtccaagtgtgatgcgatgtacccaactattttaatgtcg
catctaacatttgatttagctgataccggatttgaagatgctctgttgcaaaacgaacct
attttattgcaagaagctactgagttatttgatctcgtagcactcgggcacattcaccgg
ccacagaaagctggacttaatgtttattacagtggtgcacctgaaagacataactttggt
gatgagaaaacggcaactggtttctggattcacgaaatacatcctgctgaatgggttcac
acatatgtagtaaaccccaagtctcgtaagttcaaaacacttcgatggtgtgatatggat
atccaagcctggcttgatggtgaattggatacctttgatggagttaattcttcaattgtt
cgtgtacattactcctgcagcgaggaattacaaaagctgtttgatcgtcaaactttagaa
aaagcgttgtatagtgctagagcttatttcgtttacgagattaaagcagatatcgaacgg
accgaccgagcacgtgatgtagaagttacggaggctttaggtcctctcacagctctgcag
aaatgggcaacaaatcaagggattgaaactccggagattattatgctacagagtatgaca
tcaacgctgcttgagggggtggccccatga
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