Paenibacillus psychroresistens: EHS13_15705
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Entry
EHS13_15705 CDS
T06328
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsc03032
]
EHS13_15705 (topA)
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_15705 (topA)
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EHS13_15705 (topA)
DNA replication proteins [BR:
ppsc03032
]
Prokaryotic type
DNA Topoisomerases
EHS13_15705 (topA)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHS13_15705 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Auto_anti-p27
HVO_2753_ZBP
Toprim_3
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
QGQ96220
UniProt:
A0A6B8RIY6
LinkDB
All DBs
Position
3521623..3523719
Genome browser
AA seq
698 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVKNNFEPKYITIRGK
GSILKEIKDAAKRVKNVYLAADPDREGEAIAWHLAHYLDLEVGEPCRVVFNEITKQAVKD
AFKNPRPINLDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVTVKMIYDREH
EINEFIPEEYWSITAQLLAGTTAFEAKFHAMNKDKKELHTEAEVQVILDSILNADFLVSE
VKEKERLRNPSAPFITSTLQQEAARKLNFRAAKTMSVAQQLYEGIDLGKEGTVGLITYMR
TDSTRISPIAQEEAKEFIIQKYGPSYAPETPRVYSKKAVNAQEAHEAIRPSSVLREPDEV
KSFLTKDQHRLYKLVWERFVSSQMTSAILDTMTIDFAVGDATFRSVGSKMKFPGFMKIYV
EGNDDGTTDEDRLLPPLKEGNKVEKTDILPKQHFTQPPPRYTEARLVRALEEMGIGRPST
YAPTLETVQKRGYVALEEKKFIPTELGELVIELMIEFFPEILDVAFTAQMEEELDNVGEG
KENWVKVLETFYETFEKRLEFAEEEMKEIEIKDEVSDELCEKCEMPMVYKMGRFGKFLAC
SGFPNCRNTKPIIKDIGVTCPKCKEGHIVERRSKKGRVFFGCNLYPGCDFVSWDRPVDKP
CPQCGSMLIQKTNKSGTHIQCVECDFKEEKEDLDEAAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcactagtcatcgtggaatcacccgctaaagcgaaaacgatcggtaaatat
ttaggcagcaaatacatcgtaaaagcatcaatgggtcatattcgtgatcttccaaaaagt
cagattggcgtcgaagtcaagaataactttgaacccaaatatattaccattcgtggtaaa
ggctcgattttgaaggaaattaaagatgcagctaaacgtgtgaagaatgtctatcttgca
gccgatccggatcgtgaaggggaagcaattgcctggcatttggcgcattacctagattta
gaagtaggcgagccttgccgagttgtttttaatgaaattacgaagcaagcagtaaaggat
gcctttaaaaacccgcgtccaatcaatttggatttggttaatgcccagcaagctagacgt
atcctagatcgtttagtgggttacaaaatcagtccattgctatggaaaaaggttaaaaag
gggctttctgcaggtcgtgttcaatccgttaccgttaaaatgatctacgatcgtgagcat
gagatcaacgagttcattccagaggaatactggtccattacagctcagcttcttgctggt
acaacggcatttgaggctaaattccatgccatgaacaaggataaaaaagaactacatacc
gaagcggaagtgcaagtaattcttgactctatccttaatgctgactttctggttagtgaa
gttaaggaaaaagaacgtttacgtaatccttcggcaccatttattacaagtaccttacag
caggaagcggcaagaaagcttaatttccgagcagctaagacgatgtctgttgctcagcag
ctttacgaagggattgaccttggcaaagaaggaacagtcggtttaattacctatatgcgt
acagattcgacgcggatttctccaattgctcaagaagaagccaaggagttcattatccag
aaatatggccctagctatgcaccggaaacaccgcgagtttattcgaaaaaagctgtaaac
gcacaagaagctcatgaagcaattcgcccgagctctgtattaagagagccagatgaagtc
aaaagctttttgaccaaggatcagcatcgcttatacaagcttgtttgggaacgctttgtt
tctagccaaatgacttccgccatcttagatacaatgaccatagattttgctgttggggat
gcaacgtttcgctctgttggttctaaaatgaaatttccaggatttatgaagatatatgtt
gaaggtaatgatgatgggactacagatgaagaccgtctgcttccgccattgaaagaaggc
aataaagttgaaaagacggatatcttaccgaagcagcattttacacagcctcctccgcgg
tatacggaagcaagattggttcgtgctttggaagaaatgggtatcggacgtccaagtacg
tatgctccaactctagaaaccgttcaaaagcgtggttatgtagctttagaggaaaagaag
tttattccaacggagctaggcgaattagttattgagctaatgatcgaattttttccggag
atcctcgatgttgcctttaccgcacagatggaagaagagctggataacgttggcgagggc
aaagaaaattgggtgaaagtgctcgaaaccttctatgaaaccttcgaaaagcgcttggaa
tttgccgaagaagaaatgaaggaaatcgagataaaagatgaagtatccgatgagctttgc
gaaaagtgcgaaatgccgatggtttacaagatgggtcgctttggcaaattcctcgcatgc
tctggtttccctaattgccgaaacacaaagccgattattaaagacattggcgttacttgc
cctaaatgtaaggaaggtcatattgtcgaacgccgcagtaaaaaaggcagagtgtttttt
ggctgtaatctttatccgggctgtgattttgtatcctgggatcgaccggtcgataagccg
tgcccgcaatgtggatccatgcttattcaaaaaaccaataagagcggtactcatattcaa
tgcgtcgagtgtgactttaaagaagaaaaagaagatttggatgaagcagcagaataa
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