Paenibacillus psychroresistens: EHS13_16000
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Entry
EHS13_16000 CDS
T06328
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppsc03016
]
EHS13_16000 (truB)
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EHS13_16000 (truB)
Transfer RNA biogenesis [BR:
ppsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EHS13_16000 (truB)
Prokaryotic type
EHS13_16000 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
ToxS
Motif
Other DBs
NCBI-ProteinID:
QGQ96274
UniProt:
A0A6B8RKJ5
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All DBs
Position
3579146..3580057
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AA seq
303 aa
AA seq
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MTLEGVLPVIKPVDFTSHDVVAKVRGILGIRRIGHTGTLDPKVTGVLPLCIGRATRVVEY
IQDLPKQYEAVLTVGLATDTEDMTGTVIERVEKVDLTEADIHRVFAKFLGIIDQVPPMYS
AIKVDGQRLYDLARQGQVIERKSRQVEIYELELIKLDLELDHPQIKFRVKCSKGTYIRTL
CVDMGQALGYPAVMSELVRTATGPILLADCITLEELSELAKKNDVSSRMIATDQAIAHLP
SCQVSELEALHAMQGKKIHLSSLPNDVYEDQEIVRLYSNDERFLGLFRWQDESKSFSPEK
VFN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaaggagttttgccggtcattaaaccggtggattttacatcccacgatgtt
gttgctaaggtcagaggcattctcggcattcgtagaattggtcacaccggcacactggat
cctaaggtgaccggtgtgttgccgttatgtattggtagagcgactcgtgtggtagaatac
attcaggatttacccaagcaatatgaagctgttctaacggttgggctagcaacggataca
gaagacatgacgggaaccgtaatagaacgagtggagaaagtcgatttgacagaggctgat
attcatagagtatttgctaaatttctcggcatcatcgatcaggttcctcccatgtattca
gcaataaaagtagacgggcagcgtttatatgatcttgccagacaaggacaggttatcgag
cgtaaatcacgccaggttgaaatttatgagcttgagttaatcaagttggatttggagctt
gaccatccacagatcaaatttcgtgttaaatgctctaaaggtacttatattcgtactttg
tgtgtagatatgggccaagcattgggatatccagcagtgatgtcagagttagtgcgaaca
gcaacaggccccattctattggctgattgcatcacgttagaggagctttctgagcttgct
aagaaaaacgatgtttcatccagaatgatagcaacggatcaagcaatcgcacatttgcct
tcttgtcaggtttcagaattggaagcccttcatgcaatgcaaggaaaaaaaattcatcta
agctcgctacctaacgatgtatatgaagatcaagaaatagttcggctatattcaaacgat
gaacgttttcttggcctttttcgttggcaggacgagtccaaaagcttttcgcccgaaaaa
gtatttaattga
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