Paenibacillus psychroresistens: EHS13_17025
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Entry
EHS13_17025 CDS
T06328
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_17025
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHS13_17025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma2
Sigma70_ECF
TetR_N
HTH_23
GerE
UPF0122
HTH_24
HTH_Mga
HrcA_DNA-bdg
PH0730-like_N
Enterochelin_N
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QGQ96464
UniProt:
A0A6B8RL28
LinkDB
All DBs
Position
3783677..3784222
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AA seq
181 aa
AA seq
DB search
MDVHMDFDYLRTVADTSDKKAIVVDLMTAFGEKVWNYAFSLTRKREQADDITQEVFIKVY
RNLFTFRNEASIKTWLFTITRNTAYSYRRTAFFRKVSLVSHAETLQTQRSAENEVMEKIG
VSDIWEKVMQLPLKYREVIILFGYDQLSMKEIAEVLDINEGTVKSRLHNARLRLLKLKGG
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccatatggattttgattatttacgaacagtagccgatacatcggataaaaaa
gcaattgtggtcgatcttatgacagcttttggcgaaaaggtgtggaattatgcattcagt
ctgacacgtaaacgtgagcaagcagacgatattactcaggaagtatttattaaggtttac
cgaaatctatttacctttcgcaatgaggcttccattaaaacatggttatttacgatcacg
cgcaatacagcctattcttatcgtaggaccgcatttttccgtaaggtctcgctggttagc
catgccgaaaccttgcaaacgcagaggtctgctgaaaacgaagttatggaaaaaatcggt
gtgagtgatatttgggaaaaagttatgcagctccctttaaaatatcgtgaagtgattatt
ctgtttggttatgatcaattatcgatgaaagagattgctgaagttttagatattaatgag
ggtacagtaaaatccagattacataatgcgcggctgagattgcttaaattaaagggaggg
gagtaa
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