Paenibacillus psychroresistens: EHS13_17275
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Entry
EHS13_17275 CDS
T06328
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_17275
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHS13_17275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
PhyR_sigma2
Xre-like-HTH
HTH_10
HTH_AsnC-type
Sigma70_ECF
DUF134
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QGQ96511
UniProt:
A0A6B8RJ70
LinkDB
All DBs
Position
3832585..3833139
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AA seq
184 aa
AA seq
DB search
MIATEHDYLIHVEYMDDISFRNLMEAYGEEVWGYAYSITRNTHQADDIAQEVFLKAYTKI
AEFRGESSIKTWLLTITRNLAYNIRKSAFIRRVTLVDVVRGSGSQNSAESQYLDQSYTDD
LWKIVMKLPTKYREVLQLDARHQLSGKEMSSLLGISEGTVKSRLYRARQAVTKSLKEANG
HEND
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgattgctacggaacatgactatctaatacatgtcgaatacatggatgatattagcttt
cgaaacctgatggaggcgtatggagaagaagtttggggatatgcttattcgattacacgg
aatactcatcaagccgatgatattgctcaggaggtttttcttaaagcctatacgaaaatt
gcagagtttcgcggagaatcttctattaagacttggctgctgacgatcactcgcaatctt
gcctataatatacgcaaatcagccttcattcgtagagttactttagtagatgttgtacga
gggagcggatcgcagaattcagccgaaagtcagtatttggatcagtcttatacagatgac
ctctggaagatagtgatgaagctgcctaccaaatatcgtgaagtgctgcagcttgatgcc
aggcaccaattatctggtaaggaaatgtccagtttgttgggcatttccgaaggtacggtg
aaatcccggctttatcgggctcgccaagcggtaacgaaatcacttaaggaggcaaatggc
catgaaaacgactaa
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