Paenibacillus psychroresistens: EHS13_22445
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Entry
EHS13_22445 CDS
T06328
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHS13_22445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsc03019
]
EHS13_22445
03009 Ribosome biogenesis [BR:
ppsc03009
]
EHS13_22445
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHS13_22445
Messenger RNA biogenesis [BR:
ppsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHS13_22445
Ribosome biogenesis [BR:
ppsc03009
]
Prokaryotic type
rRNA helicases
EHS13_22445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QGQ97448
UniProt:
A0A6B8RQ76
LinkDB
All DBs
Position
complement(4916723..4918321)
Genome browser
AA seq
532 aa
AA seq
DB search
MKTFNEFGLEPKVLQAITELGYEESTPIQEATIPLAMEGRDLIGQAQTGTGKTAAFGIPL
IHKIQVKEEKIVALIMCPTRELAIQVAEDIEKLGRFKGIRSLPIYGGQDIVKQIRSLKKK
PQIIIGTPGRLLDHINRKTIKLEDVQTVILDEADEMLDMGFMEDIQSILKLVPATRHTML
FSATMPMNIQKLAQQFLRNPEHVSVMSKNITAPLIHQAYIEVHEKQKFEALSRLIDMEAP
DLAIIFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVSHVINFDMPQDPESYVHRIGRTGRAGKEGKALTFVTPREIDHLHFIEKVTK
HKIDKKPLPSMAEAIEGKQKATAERILDAVQNEKGHEFRGLAIQLLEQYDSVNLLSCALQ
LLTGDSKEVSVELTPEDPLRAKKRHGDIRSSGRRPSAPYSSGSSSGGSSGGRRYDRSSGS
GGSSTGGSSSRPPRKEGGGWEGRDSRPGNRDYKGTNRDANKSPRSKEDFVNK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacatttaacgagtttggccttgaacctaaggtactacaagcaattactgaattg
gggtacgaggaatcaacacccattcaggaggctacaattcctttggctatggaaggtaga
gatttaatcggtcaagcccaaaccggaacgggtaagacggcggcattcggtattcctcta
atccacaaaattcaagttaaagaagagaaaatcgttgcacttatcatgtgtcctacacgt
gaattggcgattcaagttgcagaagatatcgagaaattgggacgtttcaaggggattcgt
tcattgccgatttatggcggccaagatattgtgaagcaaattcgctctttgaagaaaaag
ccgcaaattatcattggaacaccaggacgtttgttggatcatattaaccgcaagacgatt
aagctggaagatgtacaaaccgttattctagatgaagcggatgaaatgcttgatatgggc
tttatggaagacattcaatccattttgaagcttgtacctgcaacacgccacaccatgttg
ttctcggcaacaatgccaatgaacatccaaaagcttgcccaacaatttttacgcaaccct
gagcatgtttcagttatgtcgaagaatatcactgcaccattgatacatcaggcatatatt
gaagttcatgaaaaacaaaaattcgaagcgcttagtcgtttaattgatatggaagctccg
gatttagcgattatttttggacgtacaaaacgtcgggtagatgaattatcagaagcatta
caaaaacgtggttattccgctgatggtctacatggcgatttatcacaaaaccaacgtgat
gctgtaatgcgtaaattccgtgatggcagcatcgatgttctagttgcaactgatgtagca
gcaagaggcttggatgtttcaggcgtttcacatgttattaactttgatatgccgcaagat
ccagaaagctatgtacacagaattggtcgtacaggacgcgctggtaaagaaggtaaagcc
ttaacatttgtaacacctcgtgaaattgatcatttgcattttatcgagaaagttactaag
cataaaattgataaaaaacctttgccaagcatggctgaagccattgaaggcaaacaaaaa
gcaacagctgaaagaattcttgacgctgtacagaatgaaaaaggccatgaattcagaggg
cttgctatccaattgttagagcaatatgactctgtaaatttattgtcatgtgctttacaa
ttattaacaggtgacagcaaggaagtttcagtggagttaactccggaagatccgttacgc
gctaaaaagcgtcatggcgatattcgttcatcaggtagacgcccaagtgctccttattcc
tcaggcagctcatcaggtggatcttcaggtggaagacgttatgatcgcagctcaggatca
ggtggttcaagcactggaggttcaagctcacgcccgccacgtaaagaaggcggcggctgg
gaaggtcgcgatagcagaccaggcaatagagattataaaggtactaaccgggatgccaat
aaatccccgcgcagtaaagaagattttgtaaataaatga
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