Paenibacillus psychroresistens: EHS13_26770
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Entry
EHS13_26770 CDS
T06328
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHS13_26770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_26770
Enzymes [BR:
ppsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
EHS13_26770
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EHS13_26770
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
UPF0738
Phage_TAC_11
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
QGQ98231
UniProt:
A0A6B8RPE2
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All DBs
Position
complement(5884729..5885838)
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AA seq
369 aa
AA seq
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MVKIGSHVSFSETGLLNAAKEAATYGSGTFMIYTGAPQNTRRKPIEEQYIEEGKAVMAEH
GMEDIVVHAPYIINLASYKKDTFELATRFLQEEMRRTDYIGVRNIVLHPGAYTDKDAEYG
IAKIAEGLNEVLRGVKDTKVNIALETMAGKGSELGRSFEELAAIIEKVEDNARLKVCMDT
CHIHDAGYDIVNDFDGVLAHFDRVVGLDRLAVLHLNDSKNMRGAGKDRHAPIGAGMIGFK
AIQAIVQHEKLGHIPMILETPWIGKNDKTQRPMYETEIALLRGNTEARFGVEFLDQVERL
DHFFSKQSIDHREFVLNTWDLLKNDEKAKKVDKREPMERLYDLIEAEQLFKELSEEQINQ
RLTAWFASK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaattggttcacacgtttcattttcagaaactggcttattaaatgcagcaaaa
gaagcagcaacctatggttcgggtacttttatgatttatacaggggcaccgcaaaatacg
cgaagaaagccaattgaagagcaatacattgaagagggcaaagcggtcatggccgagcat
ggtatggaagatatcgtcgtacatgcaccttatatcattaatttagcttcctataagaag
gatacctttgaattagctactcgtttccttcaggaggaaatgcgccgtactgattatatt
ggagttcgtaatatcgtgcttcatccaggtgcctatacagataaagatgcagaatatggg
atagcgaaaattgcagagggcttaaacgaagtgttgcgtggagttaaggatacaaaagta
aatattgctcttgaaacgatggctggaaaaggctctgagcttggccgcagctttgaagag
ctagctgctattattgaaaaagtcgaggataatgctcggctgaaggtttgtatggatacc
tgtcacattcatgatgcaggctatgatattgtcaatgattttgatggggtattggctcac
tttgatcgagttgttggattggaccgtttagcagtgcttcatttaaatgatagtaagaat
atgcgaggcgcaggcaaggatcgccatgctcctataggtgcagggatgatcggctttaaa
gcgatacaagcgatcgttcagcatgagaagctcggccatatcccaatgattcttgaaaca
ccttggattggcaagaatgacaaaacacagcgtccgatgtatgaaacagaaattgcctta
ttgcgtggaaatacagaagcgcgttttggagttgagtttctcgatcaagtagagcggttg
gatcatttctttagtaaacaatctatcgatcatcgtgagtttgtattaaatacttgggac
ctgctcaaaaatgacgagaaagcgaaaaaagtggacaagcgtgaacctatggaacgttta
tatgatttgattgaagctgagcagttattcaaggaattgtcggaagaacagattaatcaa
cgattgacggcttggtttgcaagtaaataa
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