Paenibacillus psychroresistens: EHS13_28235
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Entry
EHS13_28235 CDS
T06328
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHS13_28235 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsc03019
]
EHS13_28235 (groL)
03110 Chaperones and folding catalysts [BR:
ppsc03110
]
EHS13_28235 (groL)
03029 Mitochondrial biogenesis [BR:
ppsc03029
]
EHS13_28235 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsc04147
]
EHS13_28235 (groL)
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EHS13_28235 (groL)
Messenger RNA biogenesis [BR:
ppsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EHS13_28235 (groL)
Chaperones and folding catalysts [BR:
ppsc03110
]
Heat shock proteins
HSP60 / Chaperonin
EHS13_28235 (groL)
Mitochondrial biogenesis [BR:
ppsc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EHS13_28235 (groL)
Exosome [BR:
ppsc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EHS13_28235 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EHS13_28235 (groL)
Exosomal proteins of breast cancer cells
EHS13_28235 (groL)
Exosomal proteins of colorectal cancer cells
EHS13_28235 (groL)
Exosomal proteins of bladder cancer cells
EHS13_28235 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QGQ98493
UniProt:
A0A6B8RSQ9
LinkDB
All DBs
Position
complement(6240649..6242289)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIE
KAVKAALEELVRISKPIEGKQSIAQVASISSADEEVGQLIAEAMEKVGNDGVITVEESRG
FVTELEVVEGMQFDRGYVSAYMVTDTDKMEAVLDDPYILITDKKVSNIQEILPVLEKVVQ
QGKPLVIIAEDIEGEAMATLVVNKLRGTFVCVGVKAPGFGDRRKAMLQDIAALTGGQVIT
EELGLELKSTTVDQLGRARQVRVTKENTIIVDGSGDKKDIGARISQIRAQLEDTTSDFDR
EKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNV
YAAVAAVEATGDERTGVNIVLRALEEPVRIIAQNAGQEGSVIVERLKKEAVGIGYNAASG
EWVNMFDAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPDNSKGGGMPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaaatttagtgaagacgcgcgtcgcgcaatgcttcgtggtgtagat
gctttagcaaacgcagtaaaagttacattgggtccaaaagggcgtaatgttgttcttgag
aaaaaattcggcagcccattgatcactaatgatggtgttacaattgctaaagaaatcgag
cttgaagatgcgtttgagaacatgggcgcacaattggttaaagaagtagctactaagact
aatgacgttgccggtgacggaacaacaacagcaactgtacttgcacaagctatgattcgc
gaaggccttaaaaacgtaactgcgggcgcaaacccaatggttatccgcaagggtatcgaa
aaagcagttaaagcagcgcttgaagaattggttcgcatctccaagccaatcgaaggcaaa
caatccattgctcaggttgcatccatttcttccgctgacgaagaagtaggtcaattgatt
gctgaagctatggaaaaagtcggaaacgacggcgttatcacagttgaagaatccagaggc
tttgtaactgagcttgaagtggttgaaggaatgcaattcgaccgtggatacgtttcagct
tacatggttactgatacagataaaatggaagctgttcttgatgatccgtacattctgatc
acagacaaaaaagtttccaacatccaagaaatcttgccagtacttgaaaaagtagttcaa
caaggtaaaccattggttatcatcgctgaagatatcgaaggcgaagcaatggctacattg
gtagtgaacaaattgcgtggaacattcgtatgcgtaggcgttaaagctcctggctttggc
gatcgccgtaaagcaatgttgcaagatatcgctgcattaactggtggtcaagtaatcact
gaagaattgggcttggaattgaaatcaacaactgtggatcaattgggtcgtgctcgtcaa
gtgcgcgttactaaagaaaacacaatcatcgttgatggttcaggcgacaagaaggatatc
ggagctcgcatttcacaaattcgtgcacagcttgaagatacaacttcagacttcgacaga
gagaaattgcaagagcgtttggctaaattgtcaggcggagttgcagtaatcaaagttgga
gcagctactgaaacagaacttaaagaacgcaagcttcgcatcgaagatgcattgaactct
actcgcgcagcggtagaagaaggtatcgtttccggtggtggtacagcgttagtgaacgta
tacgcagcagttgcagcagttgaagcaacaggcgacgaaagaactggcgttaacatcgtg
cttcgcgcgttggaagagcctgtacgcattattgcacaaaatgctgggcaagaaggttca
gtaatcgtagaacgtcttaaaaaagaagctgtgggcattggttacaatgcagcatctggc
gaatgggtcaacatgtttgacgcaggtatcgtagatccagctaaagttacacgttcagca
ctacaaaatgcagcatccgttgcagctatgttcttgactaccgaagctgttattgccgac
aaaccggacaatagcaaaggcggcggcatgccagacatgggcggtatgggcggcatgggt
ggaatgggcggcatgatgtag
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