Paenibacillus psychroresistens: EHS13_28955
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Entry
EHS13_28955 CDS
T06328
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_28955
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHS13_28955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r2
HTH_23
HTH_24
HTH_38
Sigma70_ECF
KORA
GerE
HTH_28
MarR_2
HTH_29
HTH_50
DUF7343
MarR
HTH_Crp_2
HTH_7
HTH_10
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_3
DUF134
Phage_antitermQ
HTH_36
TnsD
HTH_31
Orthopox_A5L
Motif
Other DBs
NCBI-ProteinID:
QGQ98623
UniProt:
A0A6B8RT45
LinkDB
All DBs
Position
complement(6410427..6411209)
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AA seq
260 aa
AA seq
DB search
MNLNSSPLQQNEMNEYIKQYQQSNSNEIATKLILYYQPIVKMAAGKMSRNKPDLYEDLFQ
VGQMSMLRLFQQFDSSMGIPFEAYAMKSIIGHLKNYLRDKSWFIKVPRRIKEKGLLIQHA
VDELTVALERSPRMDEIADYLDLSVEETIEIMAGRESYNYISLDTPLSNEEDSSSIGDLM
GSQADDYQAFEMRADLEEAMVQLKKDERIIIFLAYNEGQSQRQIAEQLGISQMSVSRIQK
RAIGKLKVLLVDQNLSSFLE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattcatcccctcttcagcaaaatgaaatgaatgagtacattaaacaatat
caacaaagcaattcgaatgaaatagccacaaaattgattctatactatcagcctattgta
aaaatggcagcgggtaaaatgtcgaggaataaaccggatttatatgaagacctattccaa
gtcgggcaaatgtccatgcttcgtttatttcagcaatttgacagctcgatgggaattcct
tttgaagcttatgcgatgaagagcatcattggtcatctgaagaattatttgcgtgataaa
tcatggtttattaaggtacctagaagaattaaagaaaaaggtctgttgattcagcatgct
gttgatgaactgactgtagctttggaacgttcccctcgtatggatgaaattgctgattat
ctagatctatcggttgaagaaaccattgagatcatggcaggtcgagaaagctataactat
atatctttggacactcctttatccaatgaagaggatagctcatcaattggagatttaatg
ggttcacaagcagatgattaccaagcttttgagatgcgtgctgatctagaagaagccatg
gttcaattgaaaaaagatgagcggatcatcatttttttggcgtataatgaagggcaatcg
cagaggcaaattgccgaacaactaggtatttcacaaatgagcgtctcccgtattcaaaaa
agagcaattggcaaactgaaagtgcttttggtggaccaaaatttgtcatcttttctggaa
tga
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