Paenibacillus psychroresistens: EHS13_31550
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Entry
EHS13_31550 CDS
T06328
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03022
Basal transcription factors
ppsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EHS13_31550
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_31550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_31550
03036 Chromosome and associated proteins [BR:
ppsc03036
]
EHS13_31550
03400 DNA repair and recombination proteins [BR:
ppsc03400
]
EHS13_31550
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EHS13_31550
Transcription machinery [BR:
ppsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EHS13_31550
Chromosome and associated proteins [BR:
ppsc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EHS13_31550
DNA repair and recombination proteins [BR:
ppsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EHS13_31550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QGQ99093
UniProt:
A0A6B8RUG8
LinkDB
All DBs
Position
complement(7039441..7041729)
Genome browser
AA seq
762 aa
AA seq
DB search
MLEPIAIAVSVRSLVEYVFRSGSLDSGFRTMSTLAEGTKAHQKVQKQYGELDQKEVSLKA
EISHGDLLFVIDGRCDGLLIDENSGVTIDEIKSTARDVERITEDMHPVHWAQAKLYAYMY
AIENGNQRIKVQLTYVQVDTEHQKKFEQELRLAELVIFVAELVESYAPYARMVQHNKRLR
DESIRELAFPFPAFREGQRKLAGSVFKAIDEGRKLFAKAPTGIGKTVSTLYPAIKAIGAG
KAQHLFYLTARTITRTAAEEALALMKAQGLQMSSVTITAKDKICFQENVDCRKEACVYAD
GYYDRVNAAILDLMSNETLITRPLIEQYARKHTVCPFEFSLDMAYSADAVICDYNYVFDP
RISLKRLFGERKQQTVLLVDEAHNLVDRAREMFSAELVKKDFLELEREMKGVHPEVQLAA
KVLNKWFIQFRKESTEQSVVTKDKPTALIELVDAFIVQAEKVLAGGGTNEGSPRLLEVYF
SALGFQRIGKLYDGNYINYAEIARNEVQLKLFCLNPSDLLRQIGKSYRAHVYFSATLSPL
GYYMDILGAEQEDYSITLPTPFAKEQWEVSIVPISTKYIDREHTKAPLVNLLQAHVMEKL
ANYLIFFPSYEYMNSVYEAFMIDLDHDRVHTLLQRSEMPEEERESFLAAFSQSNDHALVG
FAVLGGIFSESIDLVGDRLQGVVVVGVGMPQISLERNLIKAYYDREQRSGFDYAYVYPGI
NKVLQAGGRLIRSEHDRGTLLLVDDRYKESRYRKLLPAEWLD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccaatcgccattgcagtatctgtaaggagccttgttgagtatgtatttagg
agtggaagcttggattctggctttcgcacaatgagtacgcttgcagaaggtacgaaggct
catcagaaggttcagaagcaatatggagagctggatcagaaagaagtaagcttaaaagcg
gagatttctcatggggatctcttatttgtcattgatggaagatgcgatgggctgctaatc
gatgagaacagtggagttacgattgatgagatcaagtctactgcgagggatgttgagcgg
ataacggaggacatgcatcccgttcactgggcgcaagccaaattgtatgcctatatgtat
gctatagaaaatggaaatcagcggataaaagttcaattaacctatgtacaagtggatacg
gaacaccagaagaaattcgagcaagaattaagattagctgagctcgttatttttgttgcg
gagcttgttgagagctatgcgccttatgccagaatggtgcaacacaataagcgtttgcgg
gatgaaagcatccgtgaattggcatttccctttcctgcttttcgagaaggacagaggaag
cttgcaggctcggttttcaaagccatagatgaggggcgaaagctattcgcgaaagcaccc
actgggattggtaaaactgtatcgacgctgtatcctgctattaaagcgatcggggctgga
aaagctcagcatcttttctatcttacagcgagaactattacgagaactgcagcggaggaa
gctttagcgcttatgaaagcccaaggactgcagatgagctcggtaaccataaccgccaag
gataaaatatgctttcaagagaacgtcgattgccgcaaggaggcatgtgtttatgccgat
ggttactatgaccgcgttaatgctgcgattctggatctgatgtccaacgaaaccttaatt
actcgccccttaattgaacaatatgctcgtaaacatacagtttgcccttttgaattttcc
ctggatatggcctattcagcggatgctgtgatctgtgattataattatgtatttgatccg
agaatctccttgaaacgtctatttggggagcgtaagcagcaaacggttttgttggtagat
gaagcacataatcttgtcgatcgggctagggaaatgttctctgcagagctagtgaagaag
gactttttagagctggagcgggaaatgaagggggttcatccagaagtccaactagcagct
aaggtgctcaataaatggtttatccaattcagaaaagagtctaccgagcaatccgttgtc
actaaggataaacctacagcacttattgagcttgttgatgctttcattgtccaagcagaa
aaagtgcttgctggaggcggaactaacgagggcagccccagactactggaagtgtatttc
tctgcgctaggcttccaaagaattggtaagctatatgatgggaattacattaactatgcg
gaaattgcgcgtaatgaggttcagcttaagctattctgcttgaatccttctgacttactc
cgacagattggtaaaagctacagagcacatgtttatttctcggcaacactttcacctcta
ggttattacatggacatattaggtgcggaacaagaggattattcgattacattgccaacc
ccattcgccaaagaacagtgggaggtttccattgtaccaatctctacgaagtatatagat
cgagagcatacaaaagctccgttagttaatttgcttcaggcacatgtgatggagaagctg
gctaattatctgatcttcttcccgtcttatgaatatatgaatagtgtttatgaagctttt
atgattgatctagatcatgatcgagttcacactttactgcaaagatcagagatgccagaa
gaggagagggagagctttctcgcggctttcagtcagagcaatgatcatgctttggttggg
tttgcggtcttaggcggtattttctcggagagcattgatttggttggagatcggctgcag
ggtgttgtcgttgttggtgttggcatgccgcagattagcttggagcgtaatcttattaaa
gcttattatgatagggaacaacgtagtggctttgattatgcctatgtgtaccctgggatc
aataaagtgctgcaagccggaggaagactcatccgttcggagcatgatcggggaacactt
ttgttagttgatgatcggtataaggagtcacgatatcgcaagctgcttcccgcggaatgg
ctggattaa
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