Paenibacillus psychroresistens: EHS13_34725
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Entry
EHS13_34725 CDS
T06328
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHS13_34725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsc03019
]
EHS13_34725
03009 Ribosome biogenesis [BR:
ppsc03009
]
EHS13_34725
Enzymes [BR:
ppsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EHS13_34725
Messenger RNA biogenesis [BR:
ppsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHS13_34725
Ribosome biogenesis [BR:
ppsc03009
]
Prokaryotic type
rRNA helicases
EHS13_34725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
UvrD-helicase
UTP25_NTPase-like
AAA_30
SWI2_SNF2
RuvA_C
Motif
Other DBs
NCBI-ProteinID:
QGQ99654
UniProt:
A0A6B8RV64
LinkDB
All DBs
Position
complement(7770113..7771561)
Genome browser
AA seq
482 aa
AA seq
DB search
MSASSFSDYTLSEEIVRALESLGYTKPTEVQSKVIPIALTKRDIAVKSQTGSGKTAAFGI
PLCEMVDWEENKPQVLILTPTRELAAQVKEDITNIGRYKRIKATAIYGKEPFIKQKTELK
QKSHFVVGTPGRVLDHIERGSFDLERLEYLVIDEADEMLRMGFIDQVESIIKALPKERMT
MLFSATLPKDVENLCHRYMNNPLDIEIETTESSTVKIDHSLYIVRENDKFSLFKDITTLE
NPDSCIVFCRTQEQVDHVANELDRIGYTCDKIHGGMVQEDRFKVMNEFKRGEYRYLVATD
VAARGIDIDSITHVINYDLPLTKESYVHRTGRTGRAGKTGIAISFVTPHEDKFLSDIEGY
IGFEIQQKEAPSKEEVAAAKATFDAKMSTQPPVKKEKSENLNKEILKLFFNGGKKKKLRA
VDFVGTIAKIEGVTVEDIGIITIEENISYVDILNGKGMLVIKAMKTTTIKGKQLKVYEAN
KK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagcagctttagtgattatacattaagtgaagaaatcgtccgtgcattagaa
agcttgggttataccaagccaacagaggtacaaagtaaagtaattccaatcgcgcttacg
aagcgggatattgctgtgaaatcacaaacaggcagcggcaagacggctgcattcggcatt
ccgctatgtgaaatggtagattgggaagagaataagccacaggtcttaatcctaactcca
acaagagagcttgctgcacaggtcaaagaagatattactaatataggtagatataaacgg
ataaaagcaacagcgatttatggcaaagagcccttcattaaacaaaaaacggagctaaag
cagaaaagccatttcgtagtaggtacgccaggacgggtattggaccatattgagagaggt
tcgtttgatttggagcgtctggaatatctcgtgatagatgaagcggatgaaatgctgaga
atgggctttattgatcaagtggagtcgattattaaagcattgcctaaagagcgcatgacg
atgttattctccgcgactttgccgaaggatgtagaaaatctatgccatcgctatatgaac
aacccgcttgatatcgagatcgaaacaacggaaagttcaaccgttaaaatagatcattcg
ctttatatcgtgagagaaaatgataaattcagtttatttaaagacattacaactctcgaa
aatccagacagctgcattgttttttgtcggacgcaggagcaggtcgatcatgttgctaac
gaattggatcggattggttatacgtgtgataagatccatggcggtatggtgcaagaggat
cgttttaaggtaatgaatgagtttaaaagaggcgaataccgttacttggtagcgacggat
gttgcggcaagagggatcgatattgatagtattactcatgtgatcaattatgatcttcct
ttaaccaaggaaagctatgtccaccgaacgggaagaaccgggcgtgccggcaaaacagga
attgctatcagctttgttacgccgcatgaagataaatttttaagcgatatagaaggctac
attgggtttgaaattcagcaaaaggaagctccgtccaaggaagaagtagcagctgctaaa
gctacatttgatgcgaaaatgagcactcagcctcctgtaaagaaggaaaaaagtgagaat
ttgaataaagagattctcaagctgttttttaatggaggcaagaagaagaagcttagggct
gttgattttgtcgggacgattgccaagattgaaggggtaactgtcgaggatatcggaatc
attacgattgaagagaatatttcgtatgtggatattctcaacggcaagggaatgctcgtc
attaaagcaatgaaaacaacaacgattaaaggtaagcaattaaaggtgtacgaagcgaac
aaaaaataa
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