Paenibacillus psychroresistens: EHS13_35560
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Entry
EHS13_35560 CDS
T06328
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsc03000
]
EHS13_35560
Transcription factors [BR:
ppsc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EHS13_35560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
AraC_binding
ARM_TT21_5th
Intu_longin_3
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QGQ99807
UniProt:
A0A6B8RV44
LinkDB
All DBs
Position
complement(7990466..7992130)
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AA seq
554 aa
AA seq
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MNTKTPATHGPVDDDRSGRLIFSLKEIFHFNGEWHQQARRRVVRSHTIVFIREGSGTLTI
DGTKYKIEKNKLFLLTPGMLVEVSVDAGIPLETYYLTFTMALSTRSNQAWSVSEVEKIPL
INYGEIAVQNWMQVDHMIRRLHEGRDAKTGLLRWKQQLGFEEMLYTLMEEAKTNDEDSNP
LYTMERSAIYMDKHYADNIKIDDMARLSGLNASSFSRLFKKSIGMLPSDYLTHVRIERAK
EMLQYSKGMREVSQNTGFCDEYYFSRIFKKVVGIPPSIYVKKNWNTDSARTGRELKAVRV
AVTYIDEVDHLIALGLLPIAVPNDHNEDHTEHIIPYLQEYLQDAPRIGCEQTISKDLLRK
LNPDMIIACRFMRNWGITELDKIASTHYYFWEVDWRNTHRELAKVLGQEEKAERNIEQFN
RQVLTARDTMHKRAGGKKFVFLEMTQQGIRVSPYTSNGGWLLFQQLELTPASVVTDNNWN
QLIMPEEAAAINADYIIVGRRSGSQQVYNQFMAHSAVRKKKLLEVPRYPWAKGGPIAYSN
GINHALSLFENMHK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaaaacaccagctactcacggtcctgtggatgatgatcgttcaggaagatta
attttttctctgaaagaaatctttcattttaacggagagtggcatcaacaggcgaggcga
agagttgtccgcagccatacgattgttttcatcagggaaggctcggggacgttaacgatt
gatggcacaaaatacaaaattgagaaaaataaactgtttctgttgacgccgggcatgctc
gttgaggtgtcagtagatgcaggcatcccactggaaacctattacctaacatttacaatg
gcattgtcaacaagaagcaatcaggcttggtcagtaagtgaagtggaaaaaattccgcta
atcaattacggcgagatcgcagtacagaactggatgcaggtcgatcatatgatcaggcgg
ttgcatgaggggcgggacgccaagacaggactgcttcgctggaagcagcagttggggttt
gaggagatgctgtataccttaatggaggaagccaagacgaacgacgaggactccaatccg
ctatatactatggagcgatccgcaatttatatggataagcattatgcagacaacattaaa
atcgatgatatggccagacttagcgggttgaatgccagctcattctcgagattgttcaaa
aaatcaataggtatgcttcccagcgattacctgacccatgtcaggatagaacgagccaaa
gaaatgctgcagtattcgaaggggatgcgggaagtatcgcaaaacacaggcttttgcgat
gagtattattttagccgaatatttaaaaaggttgtaggcattccaccttcaatttatgta
aaaaagaactggaatacggatagcgccagaacgggtcgcgagttgaaagcggtaagagtg
gcagtgacatatatcgacgaagtggatcatttgattgctttggggctgttgcccattgct
gtacccaatgatcataatgaagaccatacggaacacataatcccatacttacaggaatat
ttgcaggacgccccgagaatcggctgtgagcaaacgatcagcaaagatctgctacggaag
ctgaatcccgatatgatcattgcttgcaggtttatgagaaattggggaataacggaattg
gacaaaattgcctcgactcattattatttctgggaggtggactggcggaacacccatcgg
gagctggctaaggttctcgggcaagaagagaaagctgaacgcaatatcgagcagttcaat
cggcaagtgctgaccgcccgcgatacaatgcataagcgggctggcggcaagaaatttgtc
tttctggagatgacgcagcaggggattcgtgtgagcccttacaccagcaatggcgggtgg
ctgttgtttcaacagctcgaactaacaccggcttcggtcgttaccgataataattggaac
caactgataatgccagaggaagcggcagcgattaacgcggattatatcatagtcggcaga
agaagcggttcgcagcaggtatacaatcagttcatggcgcattctgctgtccggaagaag
aagctgctggaagtgccgcgctatccatgggctaagggtggccctatcgcttattcaaat
ggaattaaccatgctctgtccctttttgaaaatatgcacaaataa
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