Podospora pseudocomata: 87905381
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Entry
87905381 CDS
T09797
Symbol
APN1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
87905381 (APN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
87905381 (APN1)
Enzymes [BR:
ppsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
87905381 (APN1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
87905381 (APN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
87905381
NCBI-ProteinID:
XP_062748440
UniProt:
A0ABR0GV56
LinkDB
All DBs
Position
1
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AA seq
484 aa
AA seq
DB search
MPRQSARQAAQAKPTAEAIGRVEEKVVATKVSKAKSAASVVESKVEVNKRATTKRKVDYN
EDKEDESVNSNVNDINDIKEEEDDEPSTKPAPKKRKTTTTSKKTDDSMPLAARTPLNTLK
LAMKIGAHVSAAGGVQNSITNASSIGANAFAIFLKPHRTWKYPPFSPETPSLFSSLLKTN
TYTPDIILPHASYLINLAQPDKEKSTQAYSSFLDDLKRCDALGITLYNFHPGSTGGLPMS
EACARIASHLNTAHKATKSVITVLENMCGSGNIIGSSFSDLATIISLVEDKSRVGVCVDT
CHAFAAGYDIRSPEAYAKTMREFDEVVGLKYLKAFHLNDSKAPFSSHRDLHENIGQGFLG
LRAFHNVVNDERLQNIPMVLETPIEVKGPDGKKTEDKKIWADEIKLLESLIGMDADSKEF
KDLEVELQKKGAAERKRIQEQVDKKADKDAKKAAPKGKKGAAAAAKKKKKTEEEACDSCG
EESE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccaatcagccagacaagctgcccaagccaagccaaccgcagaagccatcggc
agggtcgaagagaaagtcgtcgcaaccaaagtctcaaaggcaaagtcggccgcctccgtt
gtcgagtccaaggtggaagtaaacaaaagagccacaaccaagcgcaaagtcgactacaac
gaagacaaggaagatgagagcgtcaattctaatgtcaatgacatcaatgacatcaaggaa
gaagaagacgacgaaccctccaccaagccagcccccaagaagcgcaaaacaaccaccacc
tccaaaaagacagacgacagcatgcctctcgccgcccgcacccccctgaacaccctcaaa
ctagccatgaagattggcgcccacgtctccgccgccgggggggttcaaaactccatcacc
aacgcctccagcatcggcgccaacgccttcgccatcttcctcaaacctcaccgaacctgg
aaatacccccccttctccccagaaaccccctccctcttctcctccctcctaaaaacaaac
acctacacccccgacatcatcctcccccacgccagttacctcatcaacctcgcccaaccc
gacaaggaaaaatccacccaagcctactcctccttcctcgacgacctgaagcgatgcgac
gccctgggcataaccctctacaacttccacccgggatcaaccggcggcctccccatgtcc
gaagcctgcgcccggatagcctcccacctcaacaccgcccacaaagccaccaaatccgtc
atcaccgtcctagagaacatgtgcggaagcggtaacatcatcggctcctccttctccgac
ctcgccacaatcatatccctcgtcgaagacaagtcccgcgtcggcgtctgcgtcgataca
tgccacgcctttgccgccggctacgacatccgctcgccggaagcctacgccaaaacaatg
agggaattcgacgaggtcgttgggctaaagtacttgaaagccttccatctaaatgatagc
aaagcccccttttcatcacaccgggaccttcacgagaatatcggacagggatttcttggg
ttgagagcgttccacaacgtggtcaatgatgagcggttacagaacatccctatggtgctc
gagacacctattgaagtcaaggggccggacggcaaaaagacagaagacaagaagatctgg
gcggatgagatcaagctgctcgagtcgttgatagggatggatgccgattcaaaggaattt
aaagatttggaggtggagcttcagaagaagggcgcggcagagaggaagaggattcaggag
caggtggacaagaaggctgacaaggatgccaagaaggcggcgccaaaagggaaaaaaggg
gccgctgctgctgcgaagaaaaagaagaagaccgaagaggaggcgtgtgattcttgtggt
gaggagagcgaatag
DBGET
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