Podospora pseudocomata: 87907076
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Entry
87907076 CDS
T09797
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87907076 (RFC4)
03410 Base excision repair
87907076 (RFC4)
03420 Nucleotide excision repair
87907076 (RFC4)
03430 Mismatch repair
87907076 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
87907076 (RFC4)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
87907076 (RFC4)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
87907076 (RFC4)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87907076 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
87907076 (RFC4)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87907076 (RFC4)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87907076 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
87907076 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
AAA_22
AAA_16
nSTAND3
RuvB_N
RCF1-5-like_lid
Viral_helicase1
AAA_3
DNAX_ATPase_lid
nSTAND_NTPase5
Mg_chelatase
DNA_pol3_gamma3
Rad17
MeaB
AAA_assoc_2
NTPase_1
AAA_11
Gp44_lid
KTI12
AAA_19
AAA_18
NB-ARC
Motif
Other DBs
NCBI-GeneID:
87907076
NCBI-ProteinID:
XP_062746959
UniProt:
A0ABR0GQG6
LinkDB
All DBs
Position
2
Genome browser
AA seq
357 aa
AA seq
DB search
MPAATTKKPEANGESSTAAYKAQTANPSGNPTYELPWVEKYRPVFLDDVVGNTETIERLK
IIARDGNMPHVIISGMPGIGKTTSVLCLARQLLGDAYKEAVLELNASDERGIDVVRQRIK
GFAQKKVTLPQGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPL
QSRCAILRYAKLTDEQVVKRLLQIIDAEGVKFSEDGLAALVFSAEGDMRQAINNLQSTWA
GFGFVSGDNVFKVVDSPHPIKVQAMLKACYEGNVDSALDTLRELWDLGYSSHDIISTMFR
VTKTIETLSEHSKLEFIKEIGFTHMKVLEGVQTLLQLSGCVVRLCRLNMDPKRFESR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcaacgacaaaaaagccggaagccaacggcgagtcctccaccgcagcctac
aaagcccagacagccaaccccagtggcaacccaacctacgagctcccatgggtcgaaaaa
taccgccccgttttcctcgacgacgtagtaggcaacaccgaaaccatcgagcgcctcaag
atcatcgcccgcgacggcaacatgccccacgtaatcatctctggcatgcccggcattggc
aagaccacctccgtcttgtgtctagcccgccaactcctcggggacgcctacaaagaagcc
gtgcttgaactcaacgcctctgacgagagaggtattgatgttgtgaggcagcgtatcaag
gggtttgcgcagaagaaggtgaccctcccgcaagggagacataaacttgtcatcttggac
gaagcggatagcatgacgagcggtgcccagcaggcgttgagacggacgatggagatttac
agcaatacgacgaggttcgccttcgcctgcaaccaaagcaacaaaatcatcgaacccctc
cagtcgcgctgcgccattctccgctatgcgaaattaacagacgagcaagtcgtcaaacgc
ctcttgcaaatcatcgatgcggagggtgtcaagttcagcgaggatggcctcgcggcgttg
gtgtttagtgcggaaggggatatgcgccaggcgatcaacaacctgcagtcgacgtgggct
gggttcgggtttgtctcgggggacaatgtcttcaaggttgtcgacagtcctcacccgatc
aaagtgcaggctatgctcaaggcttgttacgaggggaatgtggactcggcgcttgacacg
ttgagggagctgtgggatttggggtacagcagtcatgatattatctcgacgatgtttagg
gtgaccaagacaatcgagacgttgagcgagcatagcaagttggagtttatcaaggagatt
gggtttacgcatatgaaggttttggagggggtgcagacgctgctgcagttgagtgggtgt
gtggtgaggttgtgtaggttgaatatggatccgaagaggtttgagagtagatag
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integrated database retrieval system