Podospora pseudocomata: 87907852
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Entry
87907852 CDS
T09797
Symbol
POL3
Name
(RefSeq) DNA-directed DNA polymerase delta
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
ppsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87907852 (POL3)
03410 Base excision repair
87907852 (POL3)
03420 Nucleotide excision repair
87907852 (POL3)
03430 Mismatch repair
87907852 (POL3)
03440 Homologous recombination
87907852 (POL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
87907852 (POL3)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
87907852 (POL3)
Enzymes [BR:
ppsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
87907852 (POL3)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
87907852 (POL3)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
87907852 (POL3)
MMR (mismatch excision repair)
DNA polymerase delta complex
87907852 (POL3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_exo2
RNase_H_2
divDNApol
DNA_pol_B_2
DUF2614
Motif
Other DBs
NCBI-GeneID:
87907852
NCBI-ProteinID:
XP_062746131
UniProt:
A0ABR0GNC3
LinkDB
All DBs
Position
2
Genome browser
AA seq
1108 aa
AA seq
DB search
MPSATLPQKRAFGEASSTRRNIAATPSIATTKKRRIDEPTSSPAQRFKSSQNDSKGRMAS
SQQKSVFESEVLERLNQDISDLKQNNSEKDQAWERPPIPNDFDPSKHSLCFQAIEAEEGT
IGGGQPAVKLFGVTENGNSVLLHVKDFKHYLYVAAPVSFVVEDCLAFKAYLESQMSQNHQ
YQQVIHNVSLTMRENIYGFQGNVQNPYIKVTVTDPKHINKVRTMIERGEANWKGMWKHDG
GIMTYDSIQYLLRFMVDCSIAGMSWVEAPAGAYDLIHMNKQSNCQFEAVISYRELISHKP
SGEWSKMAPLRILSFDIECAGRKGIFPEAQHDSVIQIANIVTKYGDKKPFVRNVFCLDTT
SPIVATQILEFNDEGKMLAAWRDFLEKVDPDIIIGYNIANFDFPYLLDRAKHLKVHNFEY
WSRTHVKSVAKETNFSSKQMGNRDTKATNTNGRLQLDLLQLVQRDHQLRSYTLNSVCAHF
LGEQKEDVHHSMITELFEGTPESRRRLALYCLKDAYLPQRLMDKLSCLENYTEMARVTGV
PFNFLLARGQQVKFLSQLFRKALEQKLVIPNMRSESSEEQYEGATVIEPTRGYYDVPIAT
LDFASLYPSIIQAHNLCYTTLIKKKDIERWSLVKDEDYIVTPNGDMFVTTKKRKGLLAQI
LEELLSARKEAKRELAAETDPFKKAVLNGRQLALKISANSVYGLTGATNGKLPCLEIASS
TTAFGRQMIERTKHEVEDRYCIKNGYSHDAQVIYGDTDSVMVKFGTKELAEAMKLGEDAA
NYVSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTKPEKYDKMDTKGIETVRRDNCLLV
QTVIEKVLRMILIDRDVPGAQEYVKDTIADLLQNRVDMSKLVITKALTKDDYAAKQAHVE
LAHRMKKRDAGSAPALGDRVAYVMVKGATGSKNFERSEDPIYVLEHNVPIDTKYYLDNQL
AKPLGRIFEPILGETKAKSLLTGDHTRAISVAAPKVGGLMKFAKKTQTCMGCKKPLTGKE
ESQGAVCADDAPRVGELYKKTLDKVSDLEVRFGRLWTQCQRCQGSMHCEVICSSKDCPIF
YMRMKAKKDLEDANGELARFDFDQAAIW
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgcgacattaccgcagaaaagggcatttggcgaggcttcaagcacccggcgg
aacatcgccgcaactccctctatcgccaccaccaagaagcgccgcatcgatgagcccaca
tcgtctccagcacaacgcttcaagagctctcaaaatgacagcaaaggcagaatggcctcg
agccaacagaagagtgtttttgagagcgaagtgcttgaaagactgaatcaggacatctca
gacctcaagcaaaacaactcagaaaaggaccaagcatgggagcggccacccattccaaac
gacttcgatccctccaagcacagtctctgcttccaagccatcgaggcagaggagggcacg
atcggtggtggtcaacctgctgtgaagctatttggcgtgaccgagaacggcaactccgtt
cttttgcatgtcaaagacttcaagcactacctctatgtcgcggcgccagtctcgttcgtc
gttgaggactgccttgcgttcaaagcatatctcgaatcgcagatgtcgcaaaatcaccaa
tatcaacaggtcattcataatgtatcgctgaccatgcgcgagaacatctatggcttccaa
gggaacgtccaaaatccttatatcaaggttacggttaccgatccaaaacacatcaacaag
gtccgcaccatgatcgagagaggcgaggccaactggaaggggatgtggaagcatgatggc
ggcatcatgacctacgacagtatccagtacttgcttcggttcatggtagactgttcgatt
gctggcatgtcttgggttgaagcacccgccggcgcatatgaccttatccacatgaacaag
cagtccaactgccagttcgaagctgtcattagctaccgagagctgatttcgcataagccc
tctggagagtggtctaagatggcccctctccggattctctcgttcgatatcgagtgcgct
ggtcgcaaaggtattttccccgaggcccaacacgattccgtcattcaaatcgccaatatc
gtcaccaaatacggagacaagaagccgtttgtacgaaacgtgttctgtctcgataccaca
agtcccattgtggccactcagatcctggagtttaatgacgaagggaaaatgttggctgca
tggcgggacttcctagagaaggttgatccagatatcatcatcgggtacaatattgccaac
ttcgatttcccctatctccttgacagggcgaaacatctcaaggtgcataacttcgaatac
tggtctcgcacgcacgtcaagtcggtagcgaaggaaaccaacttctccagcaagcagatg
ggcaaccgcgacacgaaggccaccaacactaacggtcgtctccagctcgacttgcttcaa
ctggttcaacgtgaccaccaacttcgcagctataccctgaactctgtgtgcgcccatttt
cttggtgaacaaaaagaagatgtccatcactccatgatcacggagcttttcgagggtacc
ccagagtcgagacgcagactggcactctactgtctcaaggatgcctacctgccacaaaga
ctcatggacaagctgtcttgccttgaaaactacaccgaaatggcaagagttacgggggta
ccattcaactttctcctcgccagaggtcagcaagtcaaattcttgagtcagctcttccgc
aaggccctggagcaaaagcttgtcattcccaacatgagatcagagtcatcagaagagcag
tatgagggtgccactgtcattgagcctacaagaggatactacgatgtccccatcgccact
ctggatttcgcttcgctgtaccccagcatcattcaagcccacaatttgtgttacaccact
ctcatcaagaagaaggatattgagaggtggagcttagtcaaggatgaggactacatcgtt
acccccaatggcgacatgttcgttaccaccaaaaagagaaaggggctattggcccaaatt
ctagaggaattgctctcggctagaaaggaggccaagagagaacttgccgctgagacagat
ccattcaaaaaggctgtgctcaacggtcgtcaactagccttgaagatcagtgcaaactcc
gtctacggtttgactggtgccaccaacggcaaactcccctgcttggagattgctagtagt
accaccgctttcggtcgtcaaatgattgagaggacgaagcacgaagttgaggacagatat
tgcatcaagaatggctacagtcatgacgctcaggtcatctacggtgatactgattccgtc
atggtcaagtttggcaccaaggagttggccgaggccatgaagctcggcgaggatgcggcg
aattatgtgtctagcaagttcatcaagcccatcaagctcgagttcgaaaaggtgtacttt
ccctatcttctgattaacaagaagcgttatgctgggctgtactggacaaagccggagaag
tatgacaagatggacaccaagggtattgagactgtccgtcgtgacaactgtcttttggtg
caaaccgtcatcgagaaggtcctccgcatgattctcatcgatcgtgacgtccctggagct
caagaatacgtcaaagacaccatcgccgacctccttcaaaaccgcgtcgacatgtccaag
ctcgtcatcacgaaagccctcaccaaagacgactacgccgccaagcaagctcacgtcgag
ctcgcccaccgcatgaagaaacgcgacgccggttccgcccccgccctcggcgaccgtgta
gcctatgtcatggtcaaaggcgcgactggctccaagaatttcgaacgctccgaagacccc
atctacgtcctcgagcacaacgtccccatcgacacaaaatactacctcgacaatcagctc
gccaaacccctcggccgcatcttcgagcccatcctcggcgagacaaaagccaagtccttg
ctgacaggtgatcacacccgcgccatctccgtcgcggcacccaaagtaggcggtctcatg
aaatttgccaagaaaacccaaacgtgtatgggttgcaagaaacccttgacagggaaagaa
gagagtcagggcgcggtgtgtgccgatgacgcgccgagggtgggtgagttgtacaagaag
acgctggacaaggtcagtgatttggaggtgagatttgggcggttgtggacacagtgccag
aggtgtcaagggagcatgcactgtgaggtgatttgcagctcgaaggactgtccgattttt
tatatgcggatgaaggcgaagaaggatctggaggatgcgaatggggagttggcgaggttt
gattttgatcaggctgctatttggtag
DBGET
integrated database retrieval system
