Podospora pseudocomata: 87908983
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Entry
87908983 CDS
T09797
Symbol
RFC5
Name
(RefSeq) Replication factor C (RF-C) subunit
KO
K10756
replication factor C subunit 3/5
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87908983 (RFC5)
03410 Base excision repair
87908983 (RFC5)
03420 Nucleotide excision repair
87908983 (RFC5)
03430 Mismatch repair
87908983 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
87908983 (RFC5)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
87908983 (RFC5)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
87908983 (RFC5)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87908983 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
87908983 (RFC5)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
87908983 (RFC5)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87908983 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
87908983 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
Rep_fac_C
AAA_16
Rad17
ABC_tran
AAA_24
Motif
Other DBs
NCBI-GeneID:
87908983
NCBI-ProteinID:
XP_062745022
UniProt:
A0ABR0GK79
LinkDB
All DBs
Position
3:<2780017..2781453
Genome browser
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLDALTYHDELSDRLRSLAQSGDFPHLLFYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASVYHLEITPSDVGNYDRVVIQDLLKEVAQTQQ
VDQSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILVGESTAGIIAPIRSRCL
LVRVARPTVGEVEGVLRGSCEREGWEVREGLVGRVARESGRNLRRALLMLEGVYAQNEKV
TDDTPIPPPDWEGLIEQIAQEIMAEHTSARILQVRSKLYDLLTHCIPPTTILKTLTFKLM
PLIDDDLKPEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcattgtcgacaagcaccggcccagaagtctagatgctttgacatatcatgat
gaattgtctgatcgactccgttctttggctcaatcaggcgacttcccccacctcctcttc
tacggcccttccggagcaggcaaaaagactcgcatcgtcgcgacgctcaaagagctgtac
ggccccggtgtggaaaagatcaagattgacgcgcgggtctttcagacgagctcgaacagg
aagctcgagtttaacatcgtcgcgagcgtgtaccacctcgagatcacgccgtcagacgtg
gggaattatgacagggtggtgattcaggacttgctgaaggaggtggcacagacgcagcag
gttgatcagagcgcgaggcaaaggttcaaggttgtggtgattaatgaggcggatcacttg
acgagggacgcgcaggctgcgctgaggaggacgatggagaagtatagtccgaatttgagg
ctgatcctggttggggagagcacggcggggattattgctccaattaggagtcggtgtttg
cttgttagggttgcgaggccgacggtgggggaggtggagggggtgttgagggggagttgt
gagagggaggggtgggaggtgagggaggggttggtggggagggttgcgagggagagcggg
aggaatttgaggagggcgttgttgatgttggagggggtttatgcgcagaatgagaaagtg
acggacgacacaccgatcccgcccccggattgggagggactgattgagcagattgcgcag
gagattatggctgagcatacctccgcgaggatcctgcaggtgaggagcaagctttatgac
ttgctgacgcactgcatcccaccgacgaccatcttgaagacgttgacgtttaagctgatg
ccactgattgatgatgatttgaagccggaggtgatcaagtggagtgcgttttatgagcac
aggataaagacggggacaaaggtgatttttcacttggaggcgtttgtggccaagtttatg
aggatattggagatgtatttgatgagcatggatatgtag
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