Podospora pseudocomata: 87909109
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Entry
87909109 CDS
T09797
Symbol
rfc1
Name
(RefSeq) DNA replication factor C complex subunit Rfc1
KO
K10754
replication factor C subunit 1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03030
DNA replication
ppsd03410
Base excision repair
ppsd03420
Nucleotide excision repair
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
87909109 (rfc1)
03410 Base excision repair
87909109 (rfc1)
03420 Nucleotide excision repair
87909109 (rfc1)
03430 Mismatch repair
87909109 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
87909109 (rfc1)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
87909109 (rfc1)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
87909109 (rfc1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
87909109 (rfc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_16
AAA_18
AAA_14
AAA_5
BRCT_2
AAA_28
AAA_33
RuvB_N
Motif
Other DBs
NCBI-GeneID:
87909109
NCBI-ProteinID:
XP_062745160
UniProt:
A0ABR0GKB0
LinkDB
All DBs
Position
3:complement(3202142..3206289)
Genome browser
AA seq
1078 aa
AA seq
DB search
MPDIRSFFAPKGGAAAAPSKPAPKKKEEEKKGRGKARKVVEDSDEDEEVVEVKKSTRSTP
RKKAAAPIEAKGTEISTSQYFASTKAKLAATTTSSTPKKAAAKPTPELPVRSSPRSKPAA
KPAPETKTKKPVTTYKKHTIHDDDAFVDNEDEDAGDDIFAADVRGNKRKKDDYEEEESEE
EPQPKPKRIASRSVKKVKDESEEDDFEPAPKKPVAKKPAAKKPAASAASKKRKSPVTDSE
ESEEEVVKKKPAPKKAAPAKPRATKAKKDADAEPDDVKDILANIPTIQAPDAPPKDPNWK
FDFKNKGGGGNAGPAPLAGTVDIPEGEEDCLVGKTFVFTGLLKTISREDGQALVKRYGGK
VTGAPSSKTDFVVLGDDAGPSKLRKIKEHNIKTIDEEGLFYLIKTMPAGGGGGKGSEAAR
KKLEQEEQKAREEAARMEEEEKIKRAEATRAAKAAAAARGTAAPAPQPTVPLTQLWTSKY
APTALNQICGNKANVERIQGWLKNWPKHKKYDFQKRGADGMGGYRAVIISGPPGIGKTTS
AHLAAKLEGYDVIESNASDSRSKKLVENGVMEVVNNTSLLGYFAGDGKTADAAKKKIVLV
MDEVDGMSAGDRGGVGALAKLCKKTEVPMILICNDRRLPKMKPFDHVAFDIKFQRPTVDQ
IRSRVMTICHREGLKMPLPVVNALIEGSGKDIRQIINMLATAKLDQTTMDFDQTKAMAKA
WEKHVILKPWDICQKIIGGGMFSSASKATLNDKIELYFNDHEFSYLMVQENYLRAKPSAI
GGVGMHPKEQNLKHLELVDMAAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVKPASYI
AGQFGAQPTFTSWLGNNSKYGKLSRYVREIHSHMRLKSSGDHNEIRQQYLPVLWRQLVKK
LELEGKEAVEDVIELMDSYYLTREDFDFIKELGVGEQDEEKVNIDTQTKSAFTRIYNQAS
HPVPFMRATNLPAQAKKMSRDVPDLEEAIEEEDDDEAAVAEPVDDEEEELDLSKDKYVKA
SKKKAAPKKAAAPKKTAAAKKKAAAAVVMDDDEAEEEDVPVRAKAKPAAKPGGRPKKA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcggtcgttttttgcaccaaagggcggtgcggcggcggcgccatcgaag
cctgcgcccaagaagaaggaggaggagaaaaaggggcgcggcaaagcgagaaaggtcgtc
gaggacagtgatgaggatgaggaggtggtagaggtgaagaagagtaccagaagcacaccg
agaaaaaaggcagcggcgccgatcgaagccaagggcactgaaatctcgacatcacagtac
tttgcttccaccaaggccaaactagctgccactaccacgtcgagcacgccaaagaaggct
gccgccaaacccacgcccgagctccctgtgcgctccagcccacgatccaaaccggccgcc
aagcctgcccctgagacaaagacgaagaagccggtcaccacctacaagaagcacaccatc
cacgatgacgacgcatttgttgacaacgaggacgaggacgcgggagacgacatctttgcc
gctgacgtcagaggtaacaagagaaagaaggatgactacgaagaggaggaaagcgaggag
gagccacaacccaagcccaaacggattgcttcccgttctgtgaagaaggtcaaggatgag
tctgaggaggacgatttcgaacctgcgccaaagaaaccagtcgccaagaaaccagctgct
aagaaaccagctgcctctgccgcgagtaagaagcgaaagtcaccagtcaccgacagcgag
gagtcagaggaggaggtggtcaaaaagaagcccgctcccaagaaggcagcacctgcgaaa
cctcgcgccacgaaagccaagaaggacgctgatgctgagccggatgatgtcaaggacatt
cttgccaatattccgacgattcaggcacctgatgctcccccgaaggacccgaattggaag
tttgatttcaagaacaagggcggtggcggcaatgctggtccggctccgttggctggtact
gttgacattcccgaaggagaggaggactgccttgtcggcaagacatttgtcttcactggg
ctgctcaagacaatatcccgtgaagatggtcaagccctggtcaaacgatatggcggcaag
gtcaccggcgctccaagcagcaagacggactttgtcgtcctcggtgacgacgccggcccc
agcaagctcaggaagatcaaggagcacaacatcaagactattgacgaggaaggcctgttc
tatctcatcaagactatgcctgctggtggcggtggtggcaaggggtctgaggctgccaga
aagaagctcgagcaggaggaacagaaagccagagaggaagctgctcgcatggaggaggaa
gaaaagatcaagcgagccgaggcgacgagggctgccaaagctgctgctgccgcccgtgga
accgcagctccagctccccagccaacggtaccccttacccaactctggacatcaaagtac
gctcctactgccctcaaccagatttgcggcaacaaggcaaacgtagagaggatccagggt
tggcttaagaattggcccaagcacaaaaagtacgactttcaaaagaggggtgctgatggc
atgggtggttaccgagcagtcatcatctctggcccgccaggtattggcaagactacttcg
gcccacctcgccgccaagctggaggggtacgatgtcattgagagcaatgcttccgacagc
cgcagcaaaaagcttgttgagaacggggtcatggaggttgtcaacaacacctcgttattg
ggctactttgctggcgatggcaaaactgcggatgcggccaagaagaagatcgttctggtc
atggacgaggtggatggtatgtctgctggtgatcgtggcggtgttggtgcgctggccaaa
ctctgcaagaagactgaggtgcccatgatcctcatttgcaacgaccgccgtctgccaaag
atgaagccgtttgatcacgttgctttcgacatcaagttccaacgtccgactgttgatcag
attcgctctcgtgtcatgaccatctgccacagagaaggtctgaagatgcctcttccagtc
gtcaacgccttgattgagggcagcgggaaggacatccggcagatcatcaacatgctggcc
acggcgaaacttgaccagaccacgatggactttgatcagaccaaggcgatggccaaggcc
tgggagaagcacgtcatcttgaagccatgggacatttgccaaaagattattggcggtggc
atgtttagctctgccagcaaggcgaccttgaacgacaagattgagctgtacttcaacgac
cacgagttcagctacctgatggtgcaggagaactacctgcgcgccaagcccagtgctata
gggggtgtgggcatgcatccaaaggagcagaacctgaagcatcttgagctggtcgacatg
gcggctgagagcatcagcgatggcgatctggttgaccggatgatccacggtccccagcaa
cactggtctctgatgcctactcatgccgtctttagcaccgtcaagccggcctcctacatt
gccggccagttcggcgctcagcctacgtttacctcttggctgggcaacaacagcaagtac
ggcaagctgtcccgctacgtccgtgagattcactcccacatgcgtctcaagtcttctggc
gatcataatgagattcgccagcagtacttgcctgtgctgtggcgccagctcgtgaagaag
ctggagctggaaggcaaggaggcggtggaggatgtgattgagctgatggatagctactac
ttgacgagggaagactttgactttatcaaggagctgggagtgggtgagcaggacgaggag
aaggtgaatatcgacacgcagacaaagtcggcgtttacgaggatatacaaccaagcctcc
caccctgtcccctttatgcgggcgaccaacctccctgctcaagccaagaagatgagccgt
gacgtgcctgacttggaggaggcgattgaggaggaggatgatgatgaggcggctgttgcg
gagccggtggatgatgaagaggaggagttggacttgagcaaggacaagtatgtcaaggcg
tccaagaagaaggctgctccgaagaaggctgctgcgccgaagaagacggcggcggcgaag
aagaaggcggcagcggcggtggtgatggatgatgatgaggctgaggaggaggatgtgccg
gtcagggccaaggctaagccggctgcgaagcctgggggacggcctaagaaggcttga
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integrated database retrieval system
