Podospora pseudocomata: 87909347
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Entry
87909347 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
87909347
03041 Spliceosome [BR:
ppsd03041
]
87909347
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
87909347
Spliceosome [BR:
ppsd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
87909347
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
KH_NusA_2nd
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
87909347
NCBI-ProteinID:
XP_062745365
UniProt:
A0ABR0GKV1
LinkDB
All DBs
Position
3:3847823..3851317
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AA seq
584 aa
AA seq
DB search
MANPTADLSSILQLLQDSQRPANATPPVAQPGQPGPPPSLPQAPYGATPAHNPYPPQVAP
PAYQPPPPAAYSYPQPTSSGNIDLSSIRPDSTGALSFQEAIERAKASATQAGLTPYDRHN
AGYPGDRGSDSRGYQQRSRSRSPRGREGFRDSNPYRDERRDYGAPSRDYGRDRSFSPRRQ
GFSPRGHHGGGGRDRDRSPLRGSGDNVETMQVEKSLVGLIIGRQGENLRRVESESRCRVQ
FINAENEAEPYRVCRITGARAQREEAKAMINRIIADSGMRSGPPGGGGGGHLGGDRGGRD
APRPDRNAPPIPKEGEDTLVIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVSENKSVN
GLRPVNLIGTPAATKSAKELILEIVDSDSRNTATGGNARAPRNDGGYGGGGQDKINDSIY
VPSDAVGMIIGKGGETIREMQNTTGCKINVSQSSGSGETEREIGLVGSRDSIERAKVAIR
EKVEAAQNKSGGGGRGGHRDGGGARGHHRDYDNPNYGHASNQQNAPQSMPASSAAPAAGA
GGEADPYAAYGGYDAYVALWWQSQYGAQLGGQTGASQPPGAGSS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcccaccgctgacctcagctccatccttcagctgctccaggattcccagaga
cctgccaatgcgactcctcctgtcgcccagcctggccagcctggccctcctccctctctt
ccccaggcgccttatggtgctactccggcgcataacccatatccccctcaagtcgctccg
cctgcttaccagcccccacctcctgcggcctactcttaccctcagcctacttcgagcggc
aacatcgatttgagctcaatcagacccgactctacaggggctctatcgttccaggaggcc
atcgagcgagctaaagcttctgccacccaggctggcctgaccccttatgaccgacacaat
gctgggtatcccggtgatcgaggttccgactctcgcggataccaacagagatcccggtcc
agaagtccccgaggccgtgaaggctttcgtgacagcaacccttaccgagacgagcgccgg
gactacggcgccccgagtcgcgactatgggcgcgatcgctccttttccccccgccgtcag
ggtttctccccccgtggtcaccatggtggtggcggtcgcgacagagatcggtctcccctt
cgaggcagcggagacaatgtcgaaacgatgcaagtggagaagagcttggtagggctcatt
attggccgccagggcgagaaccttcgacgtgtcgagagtgagagccgttgccgcgtccag
ttcatcaacgccgagaacgaggccgagccgtatcgcgtatgcagaatcactggcgcccgc
gcccaacgcgaagaggccaaagccatgatcaatcgcatcattgcggacagcggcatgcgc
agcggaccccctggtggcggcggtggtggccatcttggcggagacagaggtggccgtgat
gctccccgtcccgatcgcaacgctccccccatcccgaaagaaggtgaagatacgcttgtg
attatggtccctgatagaaccgtgggccttattatcggtcgtggcggtgagacgattcgt
gatcttcaggaacgcagtggctgccacatcaacatcgtctcggagaacaagagtgtgaac
ggacttcgtcccgtcaacctcatcggcactccagctgccaccaagagtgccaaggagctc
atcctagaaattgtggacagtgacagccgcaatacggccactggcggtaacgcgcgcgct
cctcggaacgacggtggctatggcggcggtggccaagacaaaatcaatgattccatctat
gtgccctcggatgccgttggtatgatcattggcaaaggcggcgagaccatccgggagatg
cagaacaccacgggctgcaagatcaatgtatcccagtcctctggaagtggcgagacggaa
cgcgagattgggttagtcggcagccgcgatagcatcgagcgtgccaaggttgccatccgt
gagaaggttgaagctgctcagaacaagtccggtggaggtggtcgtggtggtcatcgtgac
ggtggtggcgcccgtggtcatcaccgtgactatgacaacccgaactatggccacgcatct
aaccaacagaacgctccccagtccatgcccgctagcagtgcagctcctgctgccggcgcg
ggaggcgaagctgatccctatgctgcttatggcggttatgatgcttatgtcgcgctctgg
tggcagtcccaatatggtgctcaactcggtggccagaccggggcctcccagcctcctggc
gccggttcctcctga
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