Podospora pseudocomata: 87909888
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Entry
87909888 CDS
T09797
Symbol
CDC4
Name
(RefSeq) SCF ubiquitin ligase complex subunit cdc4
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04111
Cell cycle - yeast
ppsd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
87909888 (CDC4)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
87909888 (CDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsd04121
]
87909888 (CDC4)
Ubiquitin system [BR:
ppsd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
87909888 (CDC4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR41
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
DSE1_N
F-box-like
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
F-box
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
ASA1
CFAP251_N
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
PQQ_2
Beta-prop_ACSF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NWD2_C
WDR54
F-box_4
Motif
Other DBs
NCBI-GeneID:
87909888
NCBI-ProteinID:
XP_062744013
UniProt:
A0ABR0GH80
LinkDB
All DBs
Position
4:3405759..3410351
Genome browser
AA seq
1021 aa
AA seq
DB search
MSSPAASNGMDVRRPRSSHKVSMTWEEDEVTSRRRMQFAEECIETKTVTTTTTTKRSYPS
LFVREPRSLQSLDSKEYPLAARQTPPELRKLTFDVDDHDIEGWAEEDSINTQVRRSQSID
YANIVKSEPGVESLLDISTVRSQDVTGSSPRRSRKSAAHTASPSNTPAAGRSSQRAHKHA
GLPNAASDKLRRAVAHGSRANRGLRHPSAFLATPDTSELAALGMDRPSRLRALNTDNIES
GTSQSTSLFDTGSPAGSESQTIFSNVATPPITDADLEPYEDAINPFQSRGNINNVAVQDA
SLPSPRLSPTLAAAQPQTDVPDEDAAPDADASFSSEVTRTDRRRWIDDTQITEGDSMAMS
PMQFSSGGQSQVMGSQASQFVDPRTLIEGFEVLPNEFKTWIMYQFLRRCSRKTLRVVADV
VNPALKCDFLRQLPLELSLHILSYLDHRDLCRVAQVSKHWRHIADSNETGWKELFDHDGF
TLSSGELDRAIKQGWGWQDPVGYDGCELDLSHQNRLTLSENELVRSVVKTEKQETPVQKS
TRTSKRKRGLNHIGVDRAKRRAGAQEFRDDRTSPVPKTHKSEGPISAANAAAIAVPDPQI
GLPSLRHLHLFKSLYRRHYMIKNSWMNGKVRPEHVAFAAHPRHVITCLQFDEDKIITGSD
DTLIHVYDTKTGELRTKLEGHEGGVWALQYEGNTLVSGSTDRSVRVWDIKKGICTQTFYG
HTSTVRCLQILMPAETGAMENGKPVMMPQKPLIITGSRDSQLRIWRLPEAGSRRYIQTGP
PASDDQCPYFIRILGGHTHSVRAISAHADTLVSGSYDSTVRVWKISTGEQLHVLQGHSQK
VYSVVLDHKRNRCISGSMDSMVKIWDLATGACLHTLEGHSLLVGLLDLRDDWLVSAAADS
TLRIWDPESGRCKRTLVAHTGAITCFQHDGAKVISGSEKNVKMWSIDNGDLVQDLLTDLS
GVWQVKFDDRRCVAAVQRGNLTYIEILDFGAVRDGRPPEELGRRKLLNEGEVQRLLAEEA
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccagccgcctccaacggcatggatgttcgacgacctcgatctagccataag
gtgtctatgacctgggaggaggatgaggtcacttctcgccggaggatgcagtttgccgag
gagtgcatcgagaccaagactgtaaccaccacgaccacgaccaagaggtcctatccgtcc
ctgtttgttcgtgagccacggagcttgcagtcgctcgactcaaaagagtaccccctcgcc
gccagacaaaccccgcctgaactccgaaagttgacgtttgatgttgacgaccacgatatc
gagggttgggctgaggaggacagcataaatacccaggtgcgacgttcacaaagtattgac
tatgccaacatcgtcaaatctgaacctggcgtggagagtctcttggacatctccactgtt
cgctctcaggatgtgaccgggtcgagcccgcgcagatcacggaaatcggccgcccacaca
gcttcacccagcaacacaccagccgccggaagaagctcacagagggctcacaagcacgcc
ggcctccctaacgccgcatcagataaacttcggcgcgccgtagcacatggatctcgtgcg
aacaggggtcttcgacacccttccgcctttttagccaccccggataccagcgagcttgct
gcccttggcatggaccgaccctcgcgcctgagagccttgaatactgacaatatcgagtcc
ggcaccagccagtcaacttccctcttcgataccggcagtccggctggcagtgaatcgcaa
accattttcagcaatgtggccaccccgcccatcaccgatgccgatctcgaaccctacgag
gatgccatcaacccctttcagtcaagaggaaatatcaacaacgttgcggtccaagatgcc
agcctcccaagtccacgtctgtcccccacgttggccgccgcccagcctcaaacagacgtt
cccgatgaagacgcagcccctgatgccgatgcctccttttcttccgaggtaactcgcact
gatcggagacggtggatcgatgatacccagatcacggaaggtgactcgatggccatgtca
cccatgcagttcagctctggtggacaatcacaggtcatgggctcacaggcttctcagttt
gtcgacccacgcaccctaattgaaggctttgaggtgctccccaacgaattcaagacgtgg
attatgtatcagtttttgcgaagatgcagccggaagacgctacgtgtggtagctgatgtg
gtgaacccggcccttaagtgcgactttctccgacaactacccctcgagctcagccttcac
atcctctcctatctcgatcaccgggacctttgccgtgtggcccaggtatccaagcactgg
cgccatattgccgacagcaacgagacagggtggaaggagctttttgaccatgatggattc
accctatcatcaggagagttggaccgtgccattaagcaaggctggggttggcaggatcct
gtcgggtatgatggttgtgagcttgatttgagccatcaaaacagactgacattaagtgaa
aacgaactcgtccggtcggtggtcaaaacagaaaagcaggagacgcctgttcaaaagtca
accaggacgtccaagcggaagcgtgggctgaatcatatcggcgttgatagagccaagcgg
cgtgctggggcccaagagtttagggatgataggacttccccggttcccaagacgcacaaa
tccgaggggcccatctcagctgccaacgccgccgctattgccgtcccggatcctcagatc
ggtcttcccagcttgcggcacctccatttgttcaagtcgctttaccggaggcactacatg
atcaaaaacagctggatgaacggcaaggtcaggcccgagcatgtcgcctttgctgcccac
ccacgccacgtcatcacttgcctccaatttgacgaagacaagatcatcactgggagcgac
gacaccttgattcacgtctatgacaccaagacgggcgaactccgcaccaagctcgaaggt
cacgaaggtggtgtctgggcgctgcagtacgagggcaacacactggtgtcgggcagcacg
gaccgatcggttcgtgtttgggacatcaagaagggcatctgcactcagaccttctacggc
cacaccagtactgtgcgctgtttgcaaattttgatgcctgcagagacgggagcgatggag
aatggaaagccggtcatgatgccccagaagcccttgataatcacaggttcccgagacagc
cagctgcggatttggcggttgcccgaggcgggctctcgccgatacattcagacgggccct
ccggctagtgacgatcagtgcccgtattttattcgtatcctcggcgggcacactcactcg
gtccgcgccatctcagctcatgctgacaccttggtctctgggagttacgacagcactgtc
agggtctggaaaatcagcacgggagagcaactgcatgtcctgcagggccacagtcaaaaa
gtatactcggtagttctcgatcacaagcgcaaccgttgcatttcgggctcgatggactcc
atggtcaagatctgggaccttgccacgggggcgtgcctgcacaccttggagggccacagt
ttgctggtgggacttctcgacctgcgggatgactggttggtctcggccgcagcagacagc
actctgagaatctgggaccccgaatctggccgatgcaagcggacgctcgtggcacatact
ggagctatcacctgctttcaacacgacggcgccaaggtcatttcgggcagtgagaagaat
gtcaagatgtggtctattgataatggtgatttggttcaagatctcttgacagatctgagc
ggagtgtggcaggtcaagtttgatgaccggagatgcgtggctgctgtccagcgaggaaat
ctgacatatatcgagattctcgactttggtgcagtccgcgatggcaggccgccagaagag
ctcggcagacgtaagctcctgaacgaaggagaggttcaacgcctgcttgccgaagaagct
gcgtag
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integrated database retrieval system
