Podospora pseudocomata: 87910027
Help
Entry
87910027 CDS
T09797
Symbol
SSN2
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
87910027 (SSN2)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
87910027 (SSN2)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
87910027
NCBI-ProteinID:
XP_062743853
UniProt:
A0ABR0GGN4
LinkDB
All DBs
Position
4:2872632..>2877776
Genome browser
AA seq
1506 aa
AA seq
DB search
MEAGDYDTNTLLINNLSAVSYRIYEPIASHAYTFNASDVHDALRNDGHLVYMDSVRHGIW
CFYLSTADPAVNPESIGLFARMVVCGYTLGLVGEGHFRPVDLFKSRMSGGDPINTPSSSS
SAGFAADMGLQRAQSFNMPTPTTVGNVVLADVKGYASVPIPEIHRYFMKAALESLTTYFC
RQIGAIALNPRAVLLPPEALNTDDADHVSALATFRVYLTTTGTLVISLNVSLSKSLVACS
RPFQGSMMPPSPILAAPFGHFGSLQGILDTDNQGTENGFVQSPDTQIGRLRSGSGERFSQ
WKTLVCEVLKMHGMSSNILNGSSWLNVHFSQRKPYEQRGDGKNTPLVNPGPNAPWPSVLC
FRRARVEPVGDVNFDKAVPGNAGEHGDPLSMVKSWCQGLSKREEDMSQRKKEREAALLRE
KAEVDGRNIQLNGHSPMNPRRPSNTGPALTAAGVMYPTPPDGVLQPGIMPLFDGTTVSPA
NLPPQNVVVDMEVNIQQDVSMTDGFGDEWDGQESKPEPTTAGFTDEHMYGDLDEDMFGGN
ELTDADFSFFDQPADNLDLDSHQVDGTGPSMDLQLTNNTAAQEPGRATQGPNSRQPGPTN
AQPQFTKPELKHARSILAESRQQINAQNFNHNSAAGIKRQTSPFNPETVFKKIKASFKPL
PPSRVAPKGGPPRRRSVFERVEFNPALSLDSVKYQASGPFTYQPPTLNSYLPNEGPLTTG
RLLGSAKQRRNIKELSFDLLGLQKRINGAGASPAKRDEGLSDDDESSLESDDDTTSNVSA
RASSPAKSSVLRRRPDDDVISMAASFKDLENYATDSPGYSPNDMIRLSNSEVPELSLTRW
FADPEPVPLRISVSDDDFITVAQVLTEQAAGGTLRLEPERPCSEIRDTRQGLVDAIRYSI
QGLQRALPRALMGATECHFRAFAEVQDVPLLVQPVQPQSRVQMRPADLGRPTFQILPVPH
IEVRRNNGQLALLPSALTFWESLGLGPAQGAKDVVAVCVFPHGEGMRDNATVFLERMRSM
YELMNFGSHAKLPTTASIVDGLVSVPIDQGFVSPGIHLSRPHSIYTDHMANLALSLANVP
MTEKNFVVYFAYNPENPTSIVDSCCAFQELFEHYKRCMLERKKQILNELVLQLIPLDLIA
SDTSMVVLPTPECMRLCIETYDRCTLFGGPMPAPAIILESALPREVPFRISPTPSPDILH
ENSHMHVAYAQSTDERWVTAAWTDPRGQKQMTASYCLGRRNKPLTRHISEVISEIWETTY
DLISSCKVSWKIIVTKSGVMEPQEADLWIAKSQDEHRVVTSLTLVVVDANPSLQLVPPVV
RVPPAGVHAAFYTTPVSTPQPFSVLSPEQGNNNPPTPTVVSSSHNNPATPNDNTNNDGGQ
GGDGNGVERTVVDVWDSVYSVVVAHRLSNSLGLTEINPAWASGYLVRRNASRGEDVPGVM
EVGLVWCEQVNARGVGYEGVLREVMGEFRGLGTLARARGCMTEERDLRPWHVGVVERGCR
VLGLLM
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggggactatgacaccaatactctgttaattaacaacctctctgccgtttct
tatcgtatctatgaacccattgcgtcccacgcttacacgtttaatgcctccgatgtccac
gatgcgctgcgcaacgatggccacctggtatatatggacagtgtccgccatggaatttgg
tgcttctacctctccaccgccgaccctgccgtgaatccagagtcgattggtctttttgcg
aggatggtggtctgcggctacacgttgggtcttgtgggagaggggcactttaggcccgtt
gatctgttcaagagtcgcatgtcgggcggggatcccatcaacacgccgagcagctcgtct
tcggccggatttgccgccgatatggggctgcaaagagcccagtctttcaacatgccgaca
ccaacaacggttggaaatgtggttctggctgacgtcaagggctatgcttcggtgcctatt
cccgagatccaccgatacttcatgaaagctgcgttagagtccctgacgacctatttctgc
cgacaaataggtgcaatcgccctgaacccccgtgctgtcctgcttccacccgaggctctc
aatacggacgatgccgaccatgtctcggccctggcgacctttcgggtgtatttgaccacc
actggaacacttgttatctcgctcaatgtttccctctccaagagcctggttgcatgttca
cggccttttcaaggtagcatgatgcctcccagtccaattctagccgccccatttggacat
tttggatccttgcagggcattcttgatacggataaccagggcactgaaaatgggttcgtt
cagtccccagatacccagattggccggttaaggtctgggtcaggggaaaggttttctcag
tggaagacgttggtctgcgaagtcttgaaaatgcatggcatgtcatccaacatcttgaat
ggatcctcgtggttaaatgtccacttttcgcaaaggaaaccatacgaacagcgaggcgac
ggaaagaatacaccgctcgtcaaccccggtccaaatgcgccatggccatctgttttgtgt
tttcgaagagcaagggtggagccagtgggcgatgtcaactttgacaaggcggtgccaggg
aatgctggagagcatggtgatcctctgagcatggtgaagagttggtgtcaagggttgtct
aagcgagaggaggatatgtcacaaagaaaaaaggaacgggaagctgcgcttcttcgtgaa
aaagccgaagtggacgggagaaatatccagcttaacggtcactcgccaatgaacccccgg
cgaccaagtaacacaggaccagctctaacagcagcaggcgtcatgtacccgacaccgccg
gatggagttcttcagccaggaattatgcccttgttcgatgggacaacggtcagcccagcg
aatctccccccccaaaatgtggtggtcgatatggaagtaaatatacaacaggatgtttca
atgacggatggctttggtgatgaatgggatggtcaggagtcgaaacctgaaccgacaacg
gctgggttcacagacgagcatatgtatggcgatttggacgaggatatgtttggaggaaac
gaactcacggatgccgacttcagcttctttgatcagccagcggataatctggatctagac
tctcatcaagtggacggcacggggccttctatggacctccagttaacgaataacacagcg
gctcaagaacccggacgagctacccaaggaccgaatagtcgtcaaccaggccctacaaat
gcacaaccacagtttacgaaacccgaacttaaacacgctcgcagtattctcgctgagagt
cgacagcaaatcaacgcccaaaattttaatcataattcggcagcgggtatcaagaggcag
accagtcccttcaacccagaaactgtcttcaagaaaatcaaagcctcctttaagccacta
cctccctcacgggtggcacccaaaggcggtcctccgcggcgccggagcgtgtttgagagg
gtggaattcaaccctgccctttcacttgatagcgtcaagtatcaagcgagcggaccattt
acgtaccagccaccaacactaaacagctatctgccaaacgagggccctctaaccaccggt
cgcctgctcggatctgccaaacaacggcgaaacatcaaagagttgtcgtttgatctgctt
ggcttacagaagaggatcaacggtgcaggtgccagtccagccaaaagagacgaaggactc
tcggatgacgacgaaagtagtttggaatcggatgatgatacgacaagcaatgtcagcgca
cgcgcctcttctccagcaaagtcgagtgtgctgagaaggcggcctgacgatgatgttatt
tccatggcggcttcgttcaaggacctggagaattatgccaccgactcccccggttactct
ccgaatgacatgatccgcctttccaactcggaagtgccagagttgtcgctgacgaggtgg
tttgcagacccggagccggtgccactccgtatatctgtctcggacgatgattttattact
gttgcgcaggtccttaccgagcaagcggctggtgggactttgaggttggagccagaaaga
ccatgctccgagatccgggacacacgtcaggggttggtagatgccattcggtactctatt
cagggacttcaacgggctttgccacgggcactgatgggtgcgactgagtgccattttcgg
gcgtttgctgaggttcaggatgtgccattattggttcagccagtccagccacagagtcgg
gtgcaaatgaggccggctgatctaggcaggccaacatttcaaatactgccagtaccccat
attgaagtccgtcgcaataatggccagttagcgctgttaccttcagcacttaccttctgg
gagagcttgggtcttggtccagcgcaaggtgccaaagatgttgtcgctgtgtgcgtgttt
ccacacggagaaggcatgcgggacaatgctaccgtcttcttggagaggatgagaagcatg
tacgagttgatgaattttggaagtcatgccaagctgcccacgacggcgagtattgtggat
gggcttgtctctgtcccaatcgatcaggggtttgtctctcccggtatacatctttccagg
cctcactcaatctacaccgaccacatggccaacttggccctatcactcgccaacgtgccc
atgacggagaagaactttgtcgtgtatttcgcatacaacccggaaaacccgacgtccatc
gtggattcctgctgcgccttccaggagttatttgaacattacaaacgctgcatgctagag
aggaaaaagcagatcctcaacgaactcgtcctccaactcatcccgctcgacctcattgcg
tcggatacctcgatggttgtcttgccaacgccagagtgcatgcgcctctgcatcgaaacc
tacgaccgctgcactctattcggtggccccatgcccgccccggcaatcatcctcgagagc
gccctgcccagggaagtcccctttcgaatatcccccaccccgtccccggacatcctccac
gaaaacagccacatgcatgtcgcctacgcgcaaagcacagacgagcgctgggtgacggca
gcgtggaccgacccccgcggccaaaagcaaatgacggcctcgtattgcctaggccgaagg
aacaaaccgctaacccgccacatcagcgaggtgatatccgaaatctgggaaacgacctat
gacctcatctcgtcgtgtaaagtctcgtggaaaattatcgtcaccaagtcaggcgtgatg
gaaccccaggaagcggacttgtggatcgcaaaaagtcaggacgagcacagggttgtgacg
agcttgacgctcgtggtggtggatgcgaacccgagcttgcagcttgtgccgccggtggtg
agggtgccgcctgctggggtgcatgccgcgttttataccacgcctgtgtcgacgccgcag
ccgttttcggtgctgtcgcctgaacaggggaacaataacccgcctacgccgacggttgtg
agtagtagtcataataatccggcgacgccgaatgataataccaataatgatggtgggcag
gggggggatgggaatggggtcgagaggacggtggttgatgtttgggatagtgtttactct
gttgttgtcgcgcataggctgagcaatagtctgggtttgaccgagattaatcctgcttgg
gcgagcgggtatttggtgaggaggaatgcgagtaggggggaggatgtgcctggggtgatg
gaggtggggttggtgtggtgtgaacaggtgaatgccaggggggttgggtatgagggggtg
ctgagggaggtgatgggggagtttagggggttggggacgttggcgagggcgagggggtgt
atgacggaggagagggatctcaggccttggcatgtgggtgttgttgaacgggggtgtagg
gtgttggggttgttgatgtga
DBGET
integrated database retrieval system
