Podospora pseudocomata: 87910100 Help Entry 87910100          CDS       T09797                                  Symbol SEC13 Name (RefSeq) GTPase-activating protein S13   KO K14004   protein transport protein SEC13 Organism ppsd  Podospora pseudocomata Pathway ppsd03013   Nucleocytoplasmic transport ppsd04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:ppsd00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     87910100 (SEC13)   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     87910100 (SEC13)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ppsd03019]     87910100 (SEC13)    04131 Membrane trafficking [BR:ppsd04131]     87910100 (SEC13) Messenger RNA biogenesis [BR:ppsd03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      87910100 (SEC13) Membrane trafficking [BR:ppsd04131]  Protein recycling   Rab GTPases and associated proteins    Rab11 associated proteins     87910100 (SEC13)  Endoplasmic reticulum (ER) - Golgi transport   Forward pathways    Coat protein complex II (COP-II)     87910100 (SEC13)  Autophagy   Other autophagy associated proteins    SEACAT/GATOR2 complex     87910100 (SEC13) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 EIF3I Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st WD40_Gbeta WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR75_2nd NBCH_WD40 CFAP251_N YmzC Motif Other DBs NCBI-GeneID:  87910100 NCBI-ProteinID:  XP_062743762 UniProt:  A0ABR0GGM6 LinkDB All DBs Position 4:complement(2542776..2544191) Genome browser AA seq 304 aa AA seqDB search MTAGAQVISNAGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLIETLKGHEGA VWCVSWAHPKYGNILASAGYDGKVLIWREQNGSWQRIFDFALHKASVNIVSWSPHEAGCL LACASSDGNVSVLEFKDNSWEHSSFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSAGNRR FVTGGSDNQLKIWAYDPATNSYKQEREPLVGHTDWVRDVAWSPTVLQKSYIASASQDRTV RIWTSDSASPGQWNFKVLNFDAAVWRVSWSLSGNVLAASGADNKVTLWKENLKGEWECVK TIEE NT seq 915 nt NT seq  +upstreamnt  +downstreamnt atgacagcgggcgcccaggttatcagcaacgccggtcacgatgacatgatccacgatgca gtcctggattactacggccggaggttagcgacctgctcgtcggatcgcaccatcaagatc ttcgagattgagggcgagtcacaacggttgatcgagacactcaaggggcacgagggcgca gtgtggtgcgtgtcctgggcgcatcccaagtacggcaacatcctcgcgagcgcgggctac gacggcaaggtgctcatctggcgcgagcaaaacggctcgtggcagcgcatcttcgacttt gccctccacaaggccagcgtgaacattgtgtcttggtccccccacgaggccggctgcctc ctcgcatgcgcttcctccgatggcaacgtcagcgttctcgaattcaaggacaacagctgg gagcacagcagcttccacgcgcacggtctgggtgtcaactcggtttcttgggcgcctgcc accacacccggcagcatcgtcagcagcaaccccggcccagggtcggccggcaacagacgc tttgtaactggcggttccgacaaccagctcaagatctgggcgtacgacccggctacgaac agctataagcaagagagggagcccttggtgggtcataccgattgggtcagggatgtggcg tggagcccaacggtgcttcagaagagctatattgcctctgcgtcacaggacaggacagtg cggatctggacgagtgactctgccagccccgggcagtggaatttcaaggtcctgaacttt gatgctgctgtctggcgcgtgagctggtccctgagcgggaacgttcttgcggccagcggg gcggataacaaggttaccttgtggaaggagaaccttaagggcgagtgggagtgcgtcaag accattgaggagtaa

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