Podospora pseudocomata: 87913584 Help Entry 87913584          CDS       T09797                                  Symbol PEP3 Name (RefSeq) tethering complex subunit   KO K20181   vacuolar protein sorting-associated protein 18 Organism ppsd  Podospora pseudocomata Pathway ppsd04138   Autophagy - yeast ppsd04142   Lysosome biogenesis ppsd04145   Phagocytosis ppsd04148   Efferocytosis Brite KEGG Orthology (KO) [BR:ppsd00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     87913584 (PEP3)    04142 Lysosome biogenesis     87913584 (PEP3)    04138 Autophagy - yeast     87913584 (PEP3)    04148 Efferocytosis     87913584 (PEP3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ppsd04131]     87913584 (PEP3) Membrane trafficking [BR:ppsd04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     87913584 (PEP3)    Hops complex     87913584 (PEP3) SSDB OrthologParalogGFIT Motif Pfam:  Pep3_Vps18 VPS18_solenoid_2nd VPS18_RING_C VPS18_solenoid_1st Clathrin DUF2175 zf-C3HC4_2 zf-RING_Vps41 zf-RING_5 zf-RING_16 zf_RING_Vps8_fungal zf-RING_11 zf-RING_2 zf-rbx1 zf-RING_UBOX zf_RING_Vps8 zf-C3H2C3 Motif Other DBs NCBI-GeneID:  87913584 NCBI-ProteinID:  XP_062739511 UniProt:  A0ABR0G476 LinkDB All DBs Position 7:complement(<2341293..2344703) Genome browser AA seq 986 aa AA seqDB search MALEPTTITTTTTTTTTTNGGFVAADALTDLATDTALPLFNVEQVQLQFPIYDDFVAGQV ANNVIILALSSGRILRIDLNRPDEIQDIHLPKKPSESGIIRRMFLDPTASHLLIATSLGE NYYLHSQSDTPRPLAKLRGVSIEAVAWSPALPTSSTREILIGAADGNIYEAFVEQSNEFY RKEDKYVKLVWKVGEGGPVTGLWVDSLPGGDRSGEVRRVLVATRGRLMHWVGKVGRRGHE GHQGIYGGLFEGEQPVSFGDGRPGQGGSLVVSPDVVEQGVNPTRFREEEVPERAFAWLSS QGVFHGRLLVDGNTGDLGSRVFNEGRLLAKGQLTNPNGVEAAGGKRQVSTDDVEAVALTQ WHVICLVGRRVVVANRLTGDIVYDQIALEQGQRAVGLSVDVQKNTFWLFTPQEILEIVPK EEDRDIWKIMLKFEDFEAALQHARTPAQKDAVAIAHGDHMVGKGQHSEAAGVYGKSSKPF EEVALTFIDNDQPDALRKYLLTKLGTYKRSFVMQRVMIAAWLVEVFMAKLNSLDDTIITG AELSETLSPTQTREQLEAVRAEFQDFVTKHKQDLDRQTVYDIISSHGREEELLYYANVVN DYNYVLSYWVQRERWSEALKVLKRQTDAGVFYRHSSVLMTHAATELVDILMRQSNLDPRN LIPALLEYDRNFKGPLSQNQAVRYLQYVVNQLGSTDAAVHNTLVSIYASHSSTDESQLMA YLASQGDEPNFDQDFALRLCIQNHRVLSCAHIYTSMGQYVQAVDLALSHDKIELASIVAD RPMSNPALRKKLWLAVAKKVISQSNGIKAAIEFLKRCNDLLKIEDLIPFFPDFVVIDDFK EEICNALEEYSRSIDALRKEMDESSLTAANIKVDIAALDRRYAIVEPGEKCYVCGLPLLA RQFFVFPCQHAFHSDCLGRRVLEQSGAAKGRRIREIQGLIGKGVVKGERRERVVRELDGI LCSDYAVRRINEPFVAEGEDLEEWAL NT seq 2961 nt NT seq  +upstreamnt  +downstreamnt atggcactcgaaccaaccaccatcaccaccaccaccaccaccaccaccacgacgaacggc ggtttcgtcgccgccgacgccctcaccgacctcgccactgataccgctctgcctttattc aacgtcgagcaagtccagctccagttccctatctacgacgactttgtcgcgggacaggta gccaacaatgtgatcatcctcgctctttcgtcggggcggatcctgaggattgatctcaac agacctgatgagattcaggacatccacctccccaaaaaaccctccgaatcaggcatcatc cgccgcatgttcctcgacccgaccgcctcccacctcctcatcgccacctccctcggggaa aactactacctccactcccagtccgacaccccccgccccctggcaaaactccggggtgtc tccatcgaggcggtggcctggtcgcctgcgctgccgacgagtagtacgagggagatattg attggtgcggcggatgggaatatctatgaagcgttcgttgaacaaagtaatgagttttat cgcaaggaggataagtatgtgaagctggtttggaaggttggtgagggtgggccggtgacg gggttgtgggttgattccctgcctgggggggataggagcggggaggtgaggagagtgttg gtggctacgcgggggaggctgatgcactgggttggaaaggtggggaggagggggcatgag gggcaccaagggatttatggggggttgtttgagggggagcagccggtgagttttggggat gggaggccggggcagggagggagtttggtggtgagcccggatgtggtggagcagggggtt aatccgacgaggttcagggaggaagaggtgcccgagagggcgtttgcttggttgagttcg cagggggtgtttcatggacggctgttggtggatgggaacacgggggatttggggagcagg gttttcaatgaggggaggctgttggccaaagggcagctgacgaatccgaatggggtggag gctgcgggggggaagagacaggtttcgacggatgatgtcgaggctgtggcgttgacgcag tggcatgttatttgcttggttgggaggagggtggtggttgccaatcggctgacgggggat attgtctatgatcagattgcgctggagcaggggcagagggcggtggggttgagcgtggat gttcagaaaaacactttctggttgtttacgccgcaggagatattggagattgtgcccaag gaggaggatagggatatttggaagattatgctcaagtttgaggactttgaggcggcactg cagcacgcgcgcacgcccgcgcagaaggatgcggtggcgattgcgcatggggatcacatg gtgggaaaggggcagcacagcgaggcggcgggggtgtatgggaagagcagcaagccgttt gaggaggtggcgttgacgtttatcgacaacgaccagccggatgcgctgaggaagtacttg ctgaccaagctgggcacgtacaagaggtcgtttgtaatgcagagggtcatgattgcggct tggttggtggaggtgtttatggccaagctcaactcgctggatgacactatcatcacgggg gcggagttgtctgagacgttgagcccgacccagacgagagagcagctcgaggccgtgagg gcagagtttcaggactttgtcacgaagcacaagcaggatcttgaccggcagactgtctat gatatcatcagcagccatggccgggaggaggagctgctgtattatgccaatgtcgtcaac gactacaattatgtcttgtcgtactgggttcagagggagaggtggtcggaggcgctcaag gtgctcaagaggcagaccgatgccggggtgttttaccggcacagcagcgtgcttatgacg catgccgctaccgagctggtcgatatcttgatgcggcagagcaaccttgacccacggaat ttgatcccggcgttgctggagtatgacaggaacttcaaggggccgttgagtcagaaccag gctgttcggtatctgcagtatgtggttaaccagctcggctcgacagacgcggctgttcac aacactctggtgtcgatttacgcttcgcactcgtcaacggacgagtcccagctcatggcc tatctcgcctcacagggggacgagccgaatttcgaccaggatttcgcgctgaggttgtgc atacagaaccaccgggtcctctcttgcgcacatatttacaccagcatgggacagtacgtc caggctgtagacctggccctgtcgcacgacaagatcgagctcgcgtccatcgttgccgac cggcccatgtcgaaccctgcgctgcggaaaaaactctggcttgctgtcgcgaaaaaggtc atttcgcaatccaacggcatcaaggccgcgattgagttcctcaagcgctgcaacgacctc ctcaagattgaagatttgatcccgttttttccagatttcgtcgtgattgacgatttcaaa gaggagatttgcaatgcgctggaggagtacagccggagcattgatgcgttgcggaaggag atggacgagagcagcctgacggcggcgaacattaaggtcgacattgcggcgctggacagg aggtacgcgattgtggagcccggggagaagtgctatgtttgcgggctgccgctgctggcg aggcagttttttgtttttccgtgtcagcacgcgtttcacagtgactgtttggggaggagg gtactggagcagagcggggcggcgaaggggaggaggatcagggagattcaggggctgatt gggaagggggtggtgaagggggagaggagggagagggtggtgagggagttggatggtatt ttgtgcagtgattatgctgttaggaggattaatgagccctttgtggcggagggggaggat ttggaggagtgggctttgtaa

DBGET integrated database retrieval system