Podospora pseudocomata: 87913753
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Entry
87913753 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04111
Cell cycle - yeast
ppsd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
87913753
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
87913753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppsd04121
]
87913753
Ubiquitin system [BR:
ppsd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
87913753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
F-box-like
NBCH_WD40
TRM82_WD
Beta-prop_SPT8
ASA1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
PAC11
Beta-prop_Nup120_160
Beta-prop_DCAF12
F-box
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
PEP5_VPS11_N
WDR54
Beta-prop_HPS5
WD40_like
Vts1
Beta-prop_pof12
F-box_COS111
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
87913753
NCBI-ProteinID:
XP_062739696
UniProt:
A0ABR0G4R9
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All DBs
Position
7:2941301..2945061
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AA seq
655 aa
AA seq
DB search
MSYNPPMSFSERRGAVFNEELSLNTHHGIKSLAQPRPRGPPTPSMSTPAADFDQVTGSPP
PPPTPAASPGPSNSRPDWKSADETEEAYLATIRQYFVKCNSAQRGRLLSDLLNLCTSQQL
SFVHQFVSPLLKKDPFTTLPDELCLRILSFIDDPKVLVRASQVSRRWRDLLSDDMTWKNL
CVKHDYQRRMSEVQAMRAEFYGHAQRDDGAAAGDCSGALTSNSLPASFGSSTGARPRLTS
YKSHFKQRYLVDVAWRTGGRNISKNLTQDGGVVTSLHLTSKYIIVALDNARIHVFDTEGN
ALRTLQGHVMGVWAMVPWDDILVSGGCDREVRVWDLTTGNCLHTLRGHTSTVRCLKMSDA
NTAISGSRDTTLRVWDIRNGTLIKLLVGHQASVRCLEIKGDIVVSGSYDTTAKVWSISEG
RCLHTLSGHYSQIYAIAFDGYRVATGSLDTSVRIWNAQTGECQAVLQGHTSLVGQLQMRG
GTLVTGGSDGSVRVWSLERFCPIHRLAAHDNSVTSLQFDDTRVVSGGSDGRVKVWDLKTG
QLVRELITQGEAVWRVAFEDEKCVAMALKNSRTVMEVWNFSPPEEMLNDRPVIPLKRTLD
APAPDGSRPLSAFALDYRGAGSSSSGNGMLDVDMPDAGPSTAPLQQSGGMFFRDP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaatccaccaatgagtttctccgagaggagaggggccgtctttaacgaggag
ttgtcgctgaatacacatcatggcatcaagagcctggcgcaaccgcgtcccagagggcca
ccaacaccgagtatgagcacgcccgcggcagacttcgatcaggttaccggctctccacca
cctccacccacgccggcggcatccccaggaccatccaactcgaggccggattggaagagc
gccgacgaaaccgaggaggcctaccttgctacgattcgccagtactttgtcaagtgcaac
agtgctcagagggggcggctgctgtctgatctgctgaacctctgcaccagtcaacagctg
agctttgtacaccagtttgtcagcccgctgctgaagaaggatccattcactactctccca
gatgaactgtgtcttagaatcctctcgttcatcgacgatcccaaggtgcttgtgcgcgca
tcgcaagtgtcccgaagatggcgggatttgctgagtgatgacatgacgtggaagaatcta
tgcgtaaagcacgattatcagcgtaggatgtcggaagtccaggctatgcgggcagaattc
tacggtcatgctcagcgagacgacggtgcggccgccggggactgttccggcgcgctcacg
tccaactcgctacccgcgtcgtttggaagcagcaccggcgcgcggccgaggctcacgtcg
tacaagtcacactttaagcagagatatctggttgatgtggcttggaggacgggcgggcgg
aacatctccaagaatctcacccaggatggcggcgtggtcacgagtctgcatttgacctcc
aagtacatcattgtggctcttgataatgccaggatccacgtgtttgataccgaaggaaac
gcgcttcgcaccctacagggccatgtgatgggtgtctgggctatggtgccctgggatgat
atcctggtcagtggtggctgtgacagagaggttcgggtttgggacctgacgactggaaac
tgcctgcatacgcttaggggtcacacctctacggtccgctgtcttaagatgtcagatgcc
aacacggccatttccggatccagagacacgacccttcgggtttgggatatcagaaacggc
acactgatcaagctgcttgtcggccaccaggccagcgtccggtgtttggagatcaagggt
gacatcgtggtgtctggcagttatgataccaccgccaaggtgtggagtatttccgaaggt
cgctgccttcacacgctttcggggcattacagccaaatctatgcaatcgcctttgatggc
taccgggtggcgactggcagtcttgacactagtgtcaggatctggaatgcgcagacaggt
gaatgtcaagctgttctccagggccacacctccctcgtgggtcaactgcaaatgcgtggc
ggcacactcgtcacgggcggcagtgatggctctgtgagagtatggtcgctcgagagattc
tgccctattcaccggctcgccgcccacgacaacagcgtgacgagcttgcaatttgacgac
acgagggttgtcagcggaggtagcgacgggcgagtcaaggtctgggatctcaagactggc
cagctggttcgcgagcttatcacgcagggcgaggctgtgtggagggttgcgtttgaggat
gagaagtgcgtcgcgatggcgctgaagaatagccggaccgtcatggaggtttggaacttc
tcgccaccagaagaaatgctcaacgaccgccctgttatcccactgaagagaaccctcgac
gccccagcaccagacggcagcagaccactcagcgcctttgctctggactaccggggtgct
ggaagcagtagtagcggcaatggaatgcttgacgtcgatatgcccgacgcaggaccatcc
accgcgccacttcaacagagcggtggcatgtttttccgggatccatga
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