KEGG   Podospora pseudocomata: 87913753
Entry
87913753          CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd04111  Cell cycle - yeast
ppsd04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    87913753
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    87913753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppsd04121]
    87913753
Ubiquitin system [BR:ppsd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     87913753
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_SCAP Beta-prop_WDR36-Utp21_2nd WDR55 DSE1_N Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML F-box-like NBCH_WD40 TRM82_WD Beta-prop_SPT8 ASA1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_ACSF4 PAC11 Beta-prop_Nup120_160 Beta-prop_DCAF12 F-box CFAP251_N Beta-prop_NOL10_N Beta-prop_IFT140_1st PEP5_VPS11_N WDR54 Beta-prop_HPS5 WD40_like Vts1 Beta-prop_pof12 F-box_COS111 WD40_CFAP43
Other DBs
NCBI-GeneID: 87913753
NCBI-ProteinID: XP_062739696
UniProt: A0ABR0G4R9
LinkDB
Position
7:2941301..2945061
AA seq 655 aa
MSYNPPMSFSERRGAVFNEELSLNTHHGIKSLAQPRPRGPPTPSMSTPAADFDQVTGSPP
PPPTPAASPGPSNSRPDWKSADETEEAYLATIRQYFVKCNSAQRGRLLSDLLNLCTSQQL
SFVHQFVSPLLKKDPFTTLPDELCLRILSFIDDPKVLVRASQVSRRWRDLLSDDMTWKNL
CVKHDYQRRMSEVQAMRAEFYGHAQRDDGAAAGDCSGALTSNSLPASFGSSTGARPRLTS
YKSHFKQRYLVDVAWRTGGRNISKNLTQDGGVVTSLHLTSKYIIVALDNARIHVFDTEGN
ALRTLQGHVMGVWAMVPWDDILVSGGCDREVRVWDLTTGNCLHTLRGHTSTVRCLKMSDA
NTAISGSRDTTLRVWDIRNGTLIKLLVGHQASVRCLEIKGDIVVSGSYDTTAKVWSISEG
RCLHTLSGHYSQIYAIAFDGYRVATGSLDTSVRIWNAQTGECQAVLQGHTSLVGQLQMRG
GTLVTGGSDGSVRVWSLERFCPIHRLAAHDNSVTSLQFDDTRVVSGGSDGRVKVWDLKTG
QLVRELITQGEAVWRVAFEDEKCVAMALKNSRTVMEVWNFSPPEEMLNDRPVIPLKRTLD
APAPDGSRPLSAFALDYRGAGSSSSGNGMLDVDMPDAGPSTAPLQQSGGMFFRDP
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgtcctacaatccaccaatgagtttctccgagaggagaggggccgtctttaacgaggag
ttgtcgctgaatacacatcatggcatcaagagcctggcgcaaccgcgtcccagagggcca
ccaacaccgagtatgagcacgcccgcggcagacttcgatcaggttaccggctctccacca
cctccacccacgccggcggcatccccaggaccatccaactcgaggccggattggaagagc
gccgacgaaaccgaggaggcctaccttgctacgattcgccagtactttgtcaagtgcaac
agtgctcagagggggcggctgctgtctgatctgctgaacctctgcaccagtcaacagctg
agctttgtacaccagtttgtcagcccgctgctgaagaaggatccattcactactctccca
gatgaactgtgtcttagaatcctctcgttcatcgacgatcccaaggtgcttgtgcgcgca
tcgcaagtgtcccgaagatggcgggatttgctgagtgatgacatgacgtggaagaatcta
tgcgtaaagcacgattatcagcgtaggatgtcggaagtccaggctatgcgggcagaattc
tacggtcatgctcagcgagacgacggtgcggccgccggggactgttccggcgcgctcacg
tccaactcgctacccgcgtcgtttggaagcagcaccggcgcgcggccgaggctcacgtcg
tacaagtcacactttaagcagagatatctggttgatgtggcttggaggacgggcgggcgg
aacatctccaagaatctcacccaggatggcggcgtggtcacgagtctgcatttgacctcc
aagtacatcattgtggctcttgataatgccaggatccacgtgtttgataccgaaggaaac
gcgcttcgcaccctacagggccatgtgatgggtgtctgggctatggtgccctgggatgat
atcctggtcagtggtggctgtgacagagaggttcgggtttgggacctgacgactggaaac
tgcctgcatacgcttaggggtcacacctctacggtccgctgtcttaagatgtcagatgcc
aacacggccatttccggatccagagacacgacccttcgggtttgggatatcagaaacggc
acactgatcaagctgcttgtcggccaccaggccagcgtccggtgtttggagatcaagggt
gacatcgtggtgtctggcagttatgataccaccgccaaggtgtggagtatttccgaaggt
cgctgccttcacacgctttcggggcattacagccaaatctatgcaatcgcctttgatggc
taccgggtggcgactggcagtcttgacactagtgtcaggatctggaatgcgcagacaggt
gaatgtcaagctgttctccagggccacacctccctcgtgggtcaactgcaaatgcgtggc
ggcacactcgtcacgggcggcagtgatggctctgtgagagtatggtcgctcgagagattc
tgccctattcaccggctcgccgcccacgacaacagcgtgacgagcttgcaatttgacgac
acgagggttgtcagcggaggtagcgacgggcgagtcaaggtctgggatctcaagactggc
cagctggttcgcgagcttatcacgcagggcgaggctgtgtggagggttgcgtttgaggat
gagaagtgcgtcgcgatggcgctgaagaatagccggaccgtcatggaggtttggaacttc
tcgccaccagaagaaatgctcaacgaccgccctgttatcccactgaagagaaccctcgac
gccccagcaccagacggcagcagaccactcagcgcctttgctctggactaccggggtgct
ggaagcagtagtagcggcaatggaatgcttgacgtcgatatgcccgacgcaggaccatcc
accgcgccacttcaacagagcggtggcatgtttttccgggatccatga

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