KEGG   Podospora pseudocomata: QC762_100210
Entry
QC762_100210      CDS       T09797                                 
Symbol
RTC1
Name
(RefSeq) SEA (Seh1-associated) complex subunit
  KO
K20408  SEA/GATOR complex protein SEA2/WDR24
Organism
ppsd  Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ppsd04131]
    QC762_100210 (RTC1)
Membrane trafficking [BR:ppsd04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    QC762_100210 (RTC1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_RIG_1st Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_WDR19_1st WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 87904302
NCBI-ProteinID: XP_062747275
LinkDB
Position
1
AA seq 1362 aa
MYHNQGKIMRKLLSKHATDSRESTASATVTSSPSNNYRPIAPQNVSYKTGAPLSCLDQSP
DGRSAVLASHHVLKLIKLDGGLRVQEEVDLRAILTSQPAHRNNVPTGAVADQLSIQDVKW
GSVINREVLFTACTSGIIFQYDVNRAKATRVGAPLEFIQMREDSRQVNSLDLNPHHSSWL
LSGSQDGLLRCFDVRTPVNTRTWPTYRALQSFKSHADGVRHVQWSPKDGFLFACGTEQGM
VLKWDMRKPSSPILRINAHEKACTSIAWHQDGTHLVSAGLDSKCNIWDMSKTDKRQKPKY
VISTPAPVGSLAWRPGQWSATVQGKRASQLAVSYDESGMKRFGMNSVHIWDLARPTMPYK
EIQRFDYAPNSILWHDQYLLWTAGRDGFHQCDVSFAPKVMDRQTMSAFAFSSQGEVAMCL
DERPMPTRPRPNIVHHDNASTHGETSYSSSPTTPRFSVSRSDSEDDAVGSFLGPSQPGNG
SRKRRASMRSANNLSTTPPVGASMGETLSLEDTIEVTGTYQPNQAMAIGTYPGPTNAEVD
VYLSLNYLQAIHLELPYKPGGPSLPERMTTILDHFAKAAARVRLSRLSHTWMNLLFLIKL
LLERRAQYHLEFRMDKYQNSTIKKKDAARHRSLGKLRAELPSFGIGGEASPRKMASLASF
DRVLHPRSLLSEELESTSNQPTPLARPVPDTQVIQIDDNGRKKLTPIIEPESFTLPPAAH
SRTLEPRPRLDSVPLSVTSHDSEATNASTEGYDFYDAEALNFREPGSPSRVRKPPVLRHD
SDDSFTRLFSVSDESREATGLVRTSDSDTSSQVMREAIVAAIRRDQPSASGSGSEDGEYE
SRIRGKQIAARDSPGRHPERQLLQRTETDMTSYTAFTDEHHAITQTTTDSFESRFPSQTT
DGGFGVDSPVRQSGIESPGQPQGLLSVEADLSPEDDLSPHIVETDYLHWPGDPSYPHLLW
SSNGSFGTCENLIQPEQQIAATLAYEVRKTARDAAAIVLLFKPLLAPDVLDSFQAAAILK
QHHQRLMKLQAFTEAALMRKMCMKGWPGGVLSNWGENHPNVISPAQRGVQVGLLCSSCRK
PREIDRFKGSNETIWMCERCKASMAPCAVCQQRHIAPTPGSRGNTKEGDEEQPVLATWWI
CPGCGHGGHSSCLQLWHEGFENECSSTDPDILAEFQSDGYCPMDGCGHTCLPGKGRLETA
AARTEEVGRAAAREATRNATSMKASADTESIVGGLQGHHHPHPPHQYRTTGSGKILDDQH
HHYPHYPSHGVSISNDEHSVPQSRAVESVRESLASMGISSHSHGGSSSTRHSTPGASILS
SSPGSRSSMIAAADRASGGHGGGDGRERRKSVKFVAQEDTEH
NT seq 4089 nt   +upstreamnt  +downstreamnt
atgtaccacaaccagggcaaaatcatgcgcaagctactcagcaaacatgcgacagactcg
cgcgagtccacggcctcggcgactgtcaccagctctccctccaataactaccgaccaatc
gccccccaaaatgtcagctacaagacgggtgcacccctgtcctgcctggaccagtcgcct
gacgggagaagcgctgtcctggccagccaccatgtgctgaagctgatcaagctcgacggt
ggacttcgagtacaagaggaagtcgacttgcgcgcaatcctgacctcgcagcctgcgcac
cgtaacaatgttcctactggtgccgtggccgaccagttgtctatccaggatgtcaagtgg
gggagtgttatcaacagggaagtcctcttcacggcctgcaccagcggcatcatctttcag
tacgatgtgaaccgggccaaggctacaagggtcggcgcgcctcttgaattcatccagatg
cgggaggactctcgccaggtcaactctctcgacttgaatccccatcactcttcatggctc
ttgtctggaagtcaggacggtctgttgcggtgcttcgatgtgcgcacgcctgttaacacc
aggacgtggccaacataccgtgctctccaatccttcaagtcacacgcggatggtgtcagg
catgtccagtggtcgcccaaggacggcttcctatttgcctgcgggacagagcaagggatg
gtgctgaagtgggacatgcggaaaccaagctcccctattctgaggatcaatgcccacgaa
aaggcctgtacctcgattgcatggcaccaggatggcacccatcttgtcagtgctgggctg
gatagcaagtgcaacatctgggacatgtccaagacggacaagagacagaagccaaagtat
gttatatcaacacctgcccccgttggctcactggcatggcggcctggccaatggtcggca
acagtacagggcaagcgggcctcgcagctcgcagtgtcctacgatgaaagcggcatgaag
cggtttggcatgaattcagttcacatctgggacctcgctcgccctaccatgccctacaaa
gaaatccagaggttcgactacgcacccaactccattctctggcacgaccaatacctcctc
tggaccgctggccgtgacggcttccaccagtgtgacgtctcctttgcgcccaaggtcatg
gaccgccaaacaatgtcggcctttgccttttcctcacaaggcgaggtcgccatgtgcttg
gacgagcgacctatgcccacccgcccccgacccaacattgttcaccatgacaatgcttcc
actcacggagaaacatcttacagctcgagccccactactccaagattcagcgtcagtcgc
agtgattccgaggatgacgctgttggcagcttcttgggccccagccagccaggcaacggc
agccgcaaacgcagagcgagcatgcgatctgcgaataacctcagcaccacaccacctgtt
ggggcttccatgggcgagacactgtcactggaagacacgatcgaagtgacgggtacatac
cagccaaatcaagccatggccatcggcacatatccgggccctaccaatgctgaggtagat
gtctatctcagcctcaactacctccaggccatccatctagagctaccttacaaacccggt
gggccgtctttgccagagcggatgacgaccatcttggaccactttgccaaagctgccgcc
agagttaggctttcaagactgtcacacacctggatgaacctcctcttcctgatcaagctt
ctcctcgagcgtcgcgcacagtaccacctcgagtttcggatggacaagtaccaaaactca
accatcaaaaagaaagatgcggctagacatcggtcactgggcaagctccgtgccgaacta
cccagctttgggattggcggggaagcaagcccacggaagatggcctctctggcaagtttc
gaccgggtccttcatccacgatcacttttatctgaagagctcgaaagcacctccaatcaa
cctaccccgctggctcgcccggttcccgatacacaagttatccagattgatgacaatggg
cgcaagaagctcacacccatcatcgaaccagagagcttcacgctgcctccggcggcccat
tctcgcaccctcgagcccaggccccgactagattcagtgcccctgtcggtcaccagtcat
gacagtgaggccaccaatgccagcaccgagggctacgacttttatgacgccgaggccctc
aactttcgagagcccggctcgcccagccgtgttcgaaagccgcccgttttgcgacatgat
tcggatgatagtttcacccgactcttttccgtctcggacgaaagcagggaggcgactggc
cttgtccggacctcggacagcgacacgtcgtcgcaggtcatgagggaggccattgtggcc
gccattcggcgcgaccagccaagtgccagcggaagcggaagcgaagacggcgaatacgaa
agccgcatccgtggcaaacagatcgctgccagagactcgcctggccgtcatccagagcgg
caattgcttcagcgtaccgagactgacatgacatcgtacactgcctttaccgatgagcac
cacgccatcactcagaccaccaccgacagtttcgagtcgcgcttcccgtcacagacaacg
gatggcggctttggcgtggactctccagtccgacagagcggtattgagtctcctgggcag
ccacaggggctgctgtctgtcgaggctgacttgtcccccgaagatgatttgtccccccat
attgtagagacggattacctccactggcccggcgacccaagctacccgcacttgctctgg
tcctcgaatggatcatttgggacttgtgaaaacttaatccaacccgagcagcagattgca
gccacgctggcctacgaagttcgcaagacagcccgtgacgcggccgccatcgtcctgctg
ttcaagcccctacttgcgcctgatgtccttgactcttttcaagcggcggctatcctcaag
caacaccaccagcgtctgatgaagctccaggcttttaccgaggcggctctcatgcgcaaa
atgtgtatgaagggatggcctggaggggtgctgtccaactggggcgagaaccacccgaat
gtcattagcccggctcaacgaggtgtccaggttggcctcctttgttccagctgccggaag
ccgagagagattgaccgattcaaggggtcaaatgagaccatctggatgtgtgaacgttgt
aaggccagcatggccccttgtgctgtctgtcaacagcgtcatatcgctcccacgcccggc
tcgcggggcaatacgaaggaaggtgatgaggagcagccggtgttggctacctggtggatt
tgtcctggctgcggtcacggtggacattctagctgcctccagctttggcatgaagggttt
gagaacgaatgcagttccaccgacccggatattcttgccgagttccagagtgatggttat
tgtcccatggatgggtgtggacacacatgtctgcccggaaagggaaggctcgagacagct
gcggccaggacagaagaggttggtcgggcggcagcgagggaggcaacgcgcaatgcaacc
agcatgaaggcgtctgcagacacggagagcatagtgggcggtctccaaggccaccatcat
cctcacccacctcaccagtaccgcaccacgggaagcggcaagatcttggatgaccagcac
caccactaccctcactatccttcccacggggtcagtatttcgaatgatgagcacagcgta
ccccaaagcagggcggtagagagcgttagggagtctctggccagcatgggcatctcttct
cattctcatggcggcagcagcagcacaagacacagcacgccaggagccagcatcttgagc
tcgagcccgggcagcaggtcgtcaatgatagctgctgctgatagggcgagtggcggtcac
ggtggtggggatggcagggagcggaggaagagcgtcaaatttgttgcgcaggaggatacc
gaacattga

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