Podospora pseudocomata: QC762_101470
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Entry
QC762_101470 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K07880
Ras-related protein Rab-4B
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_101470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_101470
04031 GTP-binding proteins [BR:
ppsd04031
]
QC762_101470
Membrane trafficking [BR:
ppsd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
QC762_101470
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
QC762_101470
GTP-binding proteins [BR:
ppsd04031
]
Small (monomeric) G-proteins
Rab Family
Rab2/4/14 [OT]
QC762_101470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_33
Gtr1_RagA
PduV-EutP
AAA_16
AAA_22
HflX_C
SRPRB
NACHT
AAA_5
Motif
Other DBs
NCBI-GeneID:
87904438
NCBI-ProteinID:
XP_062747372
LinkDB
All DBs
Position
1
Genome browser
AA seq
389 aa
AA seq
DB search
MSSYVELSGFGRPRRGSSAASDTSSAGTVTRGQDREQELGSMYDYLAKIILLGPSGTGKS
CLLHRFVKSEWRVLSSQTIGVEFASKIIKVGTGARRKRIKLQLWDTAGTERFRSVSRSYY
RGAAGAILVYDVTSHASFNSLQPFLNDARALASPNLSLLLVGNKVDLAASQTGAYSDYED
NDDWGRDNRLGAGGGRGGGLPTPSSIASSSVTSFQTTTTTMTDRTEQGGRGQQTPMVPSS
YSSMSTIHPGLGSQLKATIAPDGREVGAVEASRWANTVNIPVTMEVSALSGEGVDEVFGR
LARMILTKIELGEIDPDDPMSGIQYGDAGALWNAGASDGGSIKSTLTADDVGVGGRRRRG
KPKRMGQGGLREWEEVFTLTGRRRNRGCC
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctacgttgagctctccggcttcggccggccccgccggggatcctccgccgcg
agcgacacgagcagcgccggcacagtcacccgcggacaggacagagaacaagagctaggg
agcatgtacgactacttggccaaaatcatactgctaggtccaagcgggactggaaagtcc
tgtctcctccatcgtttcgtcaagtccgagtggcgcgtgctatcctcccagactatcggc
gtcgagtttgcctccaagatcatcaaagtcggtaccggcgcaaggaggaagcgaatcaaa
ctccagctttgggataccgcgggcacggaaaggttcaggtcggtgtcgaggtcgtactat
cggggcgcggcgggcgcgatactggtgtatgatgtcaccagccatgcgagcttcaacagt
ctgcagccttttctgaacgatgcgagggcgctggcgagtccgaatttgagtctgttgttg
gtggggaataaagttgacttggcggctagccagacgggagcgtactcggattatgaggat
aatgatgactgggggagggacaataggctaggagcagggggtgggaggggtggggggttg
ccgacgccgagcagtatcgccagtagcagtgttacttcttttcagactacgactacgacg
atgacggatcggactgagcaaggggggaggggtcagcagacgccgatggtgccgagttcg
tattctagtatgtcgactattcacccggggctggggtcacaactgaaggcgacgattgcg
ccggatgggagggaggtcggcgcggttgaggcgtcgaggtgggcgaacacggtgaacatt
cctgtgacgatggaggtttcggcgctgagtggggagggtgtggatgaggtctttgggagg
ttggcgaggatgattttgaccaagattgagttgggagagattgatcctgacgatccgatg
agtgggattcagtatggtgatgctggcgcgctgtggaatgctggcgcaagtgatggcggg
agcatcaagagcactttgacggctgatgacgttggcgtcgggggaagaaggagaagggga
aagccaaaacggatgggacagggtgggctgagagaatgggaggaagtcttcacgctgacg
ggaaggagaagaaacagggggtgttgttga
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