Podospora pseudocomata: QC762_101540
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Entry
QC762_101540 CDS
T09797
Symbol
YPT52
Name
(RefSeq) GTP-binding protein of the rab/ypt
KO
K07888
Ras-related protein Rab-5B
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04144
Endocytosis
ppsd04145
Phagosome
ppsd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
QC762_101540 (YPT52)
04145 Phagosome
QC762_101540 (YPT52)
04148 Efferocytosis
QC762_101540 (YPT52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_101540 (YPT52)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppsd04147
]
QC762_101540 (YPT52)
04031 GTP-binding proteins [BR:
ppsd04031
]
QC762_101540 (YPT52)
Membrane trafficking [BR:
ppsd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
QC762_101540 (YPT52)
Endosome - Lysosome transport
QC762_101540 (YPT52)
Exosome [BR:
ppsd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QC762_101540 (YPT52)
Exosomal proteins of other body fluids (saliva and urine)
QC762_101540 (YPT52)
Exosomal proteins of colorectal cancer cells
QC762_101540 (YPT52)
Exosomal proteins of melanoma cells
QC762_101540 (YPT52)
GTP-binding proteins [BR:
ppsd04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
QC762_101540 (YPT52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
87904444
NCBI-ProteinID:
XP_062747378
LinkDB
All DBs
Position
1
Genome browser
AA seq
208 aa
AA seq
DB search
MSNRFAQFKLVLLGESAVGKSSIVLRFVKDQFDSYRESTIGAAFLTQTISLDENTTVKFE
IWDTAGQERYKSLAPMYYRNANCAVVVYDITQAASLDKAKSWVKELQRQANENIIIALAG
NKLDLVTEQPDKRAIPTAEAEAYAKEAGLLFFETSAKTAENVQELFTAIAKKLPLDQVGP
RHARPGQRPGVSLAPEGANTQAGGPCAC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccgcttcgcgcagttcaagttggtcttgctaggtgaatctgctgtgggaaag
agctcgatagtattgcgcttcgtcaaggatcaatttgactcctacagggaatccactatt
ggtgccgccttcttaacacagaccatttcgctcgacgagaacacgactgtcaagtttgag
atttgggataccgctggccaggaacgctacaagtccctcgcgcccatgtactaccggaat
gcaaactgcgccgttgttgtttatgatatcacgcaagccgcgtcgctcgacaaggccaag
tcgtgggtgaaggaactccaacgacaagccaacgagaacatcatcatcgcccttgccgga
aacaagttggatttggtgacggagcaaccagacaagcgcgccatccctaccgccgaagcc
gaggcctacgcaaaggaagccggccttctcttctttgagacatccgcaaagactgccgag
aacgttcaagagttgtttactgctattgccaagaaacttccacttgatcaggttgggccg
agacatgcccggcctggtcagcggcccggagtcagtcttgctcccgaaggagccaacacg
caagccggtgggccctgcgcgtgctga
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integrated database retrieval system
