Podospora pseudocomata: QC762_102360
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Entry
QC762_102360 CDS
T09797
Symbol
USB1
Name
(RefSeq) poly(U)-specific 3'-to-5' RNA exonuclease
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_102360 (USB1)
Spliceosome [BR:
ppsd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
QC762_102360 (USB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
2_5_RNA_ligase2
CdsD_PD1
Motif
Other DBs
NCBI-GeneID:
87904529
NCBI-ProteinID:
XP_062747476
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All DBs
Position
1
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AA seq
312 aa
AA seq
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MPPLVDYGSDSDSDADTANPAPPPAKKPRLGAPGTGTATALSSGPSPDLPPLPASFHDLY
ASTARTFDDPSLHQGRTRQTPHIPGNWPSHVYIEWHPPPEFKRMLSGLIYSVRSQIRKID
PEVEITSFLESDLGVPLPLHISLSRPLNLSTFQKDLFLSDLQKILAGDQPFEIRLGRVEW
HFTSESGRAFLVLRVACPSRNNELVYLLSKINELANIYGQPQLYSWASAAEGKDVADAFH
FSIAWCLGKPSDHLERITKEVFAKPEIRTVIGMGKLTIHSIKVKIGNVVTNIPLRKEDEE
RRERKHSALLGL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctggtggattacggatccgattcggactcggacgccgacacggccaaccca
gctcctccgccagccaaaaagccaagactaggtgcacctggcaccggaacggctacggcc
ctatctagcggcccgtctccggatctgcctcctctcccggcatcattccacgacctctac
gcctccacagcccgcacctttgacgacccttccctccaccaaggtcgaaccagacaaaca
ccacacatccctgggaactggcccagccatgtttacattgaatggcatccaccgccagag
ttcaagcgcatgctatcaggcctgatatactcggtccgatcccagattcgcaagatagac
cccgaagtagaaataaccagctttctggagagcgacctaggcgtgccgttaccgttgcac
atcagcctctcccgtcctcttaatctcagcacgttccagaaagacctgtttctgtccgat
cttcaaaagatactcgctggagaccagccgttcgagatacggctcgggagggtggaatgg
cattttacctcggagagcggacgggcatttctggtgctgagagtggcctgcccgtctcga
aataatgagctcgtgtaccttttgtccaagattaacgagcttgctaatatatacggccag
ccccagctctattcgtgggcctcggctgcagaggggaaggatgttgcggacgcctttcac
ttttcgattgcttggtgtctgggtaagccgtcggatcatctcgagcgtatcacaaaagag
gtttttgcaaaacccgagatccggactgtcatcggaatgggtaaattgaccatccacagc
atcaaggtcaagattgggaatgtggtgacgaatattccgctgaggaaggaggatgaggag
aggagggagaggaagcacagtgctttgcttgggttatga
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