Podospora pseudocomata: QC762_104090
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Entry
QC762_104090 CDS
T09797
Symbol
YTH1
Name
(RefSeq) RNA-binding component of cleavage and polyadenylation factor
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
QC762_104090 (YTH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_104090 (YTH1)
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_104090 (YTH1)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
QC762_104090 (YTH1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
QC762_104090 (YTH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
87904711
NCBI-ProteinID:
XP_062747702
LinkDB
All DBs
Position
1
Genome browser
AA seq
243 aa
AA seq
DB search
MAPTTPNPHTHPYTFTFTPFLQKTYQHSLPPPSSNPPSGDQQQSQPNNNNNTGGFGSLVC
KHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSKLPPCPHY
DRGFCPLGPKCDKRHLKRNICLYYLAGFCPDGKQCRQGAHPRWTRDELMEKPTMKVEKTA
EELEREEQERERHRERERERDMERRAERDRERGGDGDRHDRGHDKGGRFGRGGGRWGGKR
GGV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccccaacaactcctaacccacacacccacccctacaccttcaccttcacccccttc
ctccaaaaaacctaccaacactccctccccccacccagcagcaaccccccctcaggcgac
caacaacaatcccaacccaacaacaacaacaacactggcggcttcggttccctagtctgc
aaacactggctccgcggcctctgcaaaaagggcctaacctgcgagttcctccacgagtac
aacctccgcaagatgcccgaatgcaacttcttcgtccgcaacggctactgctccaacggg
gacgagtgcctctacctccacatcgacccctcttccaaacttcccccctgcccccactac
gaccgcgggttttgccccttggggccaaaatgcgacaagagacatttaaagagaaacata
tgtctatactacctcgcggggttctgcccggacgggaagcagtgcaggcagggggcgcat
ccaaggtggacgagggatgagctgatggagaagcctactatgaaggtggagaagacggcg
gaggagctggagcgggaggagcaggagagggagaggcatagggagcgggagagggagagg
gatatggaacggcgggcggagagggatagggagcggggtggggatggggataggcatgat
agggggcatgacaagggggggaggtttgggagggggggggggaggtggggtgggaagagg
gggggggtatag
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integrated database retrieval system
