Podospora pseudocomata: QC762_104630
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Entry
QC762_104630 CDS
T09797
Symbol
UTP20
Name
(RefSeq) U3 snoRNP protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_104630 (UTP20)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
QC762_104630 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_CAND1
HEAT_MROH2B_C
HEAT_GCN1_C
Gluconate_2-dh3
Motif
Other DBs
NCBI-GeneID:
87904765
NCBI-ProteinID:
XP_062747762
LinkDB
All DBs
Position
1
Genome browser
AA seq
2620 aa
AA seq
DB search
MPSTTSGRIVKSQRGVKRTPHEKNHRWESFSTKISKLHSLDPLRKVRRHDLEAEDLEAST
SYLRNGLDRWAELNLSKTYVSFRLKVTRYTDSLAQILHHEDKIMDLLAEAISTHQKDSLE
PLLDLVTAFAHDLGVRFEKHYPRALGLIVELASKVHDVEAIEWTFASLAFLFKYLSRLVV
PDLRPTYDAVSPLMGKAKIPGHIARFAAEAMSFLVKKAAAPSHKEKALPLFVEHVRKDLE
SVAGTRQYELYSQGIMTMFAEALKAPNNGVHSTAPEVFAAIVRDVPEGEADLPEQTVWTD
VCCGVLTSIIHHTTIETFKTIETRIVQEATAGTRPVLFVQLLGVAAGVRRGNRIHDWSAL
VKALGQQLTQLGEVKERIEAISPRQVWDRLITRIAIIWGQAPIDALLPSLSTLNNTTTKE
PLMRWYIPFCSYLADLHPERFRGLFLKDFQKFVIAHWSRNSNEEMLCVLLPHMVENGGLP
RVKGKDGFLLPQSWQDQIVNKFVRLEDTPFPESGGFGKDAETWRDRCLPKYSALLRVLEV
TTVHPSTNARIAEVLLKKLKLALRPSSSLPTDEANFIMSDGFRAYLRMCAAPGSVDPSLA
PLLRAATPRFCHSPAFLEALLAYLMEIKAKGRSSSETSSGSDSMQEEEDPLVKSLVDNLS
APSHELRLASLRILEILESTPDSNSALATMLQCEELSLILENVRTIAVHVRKLGQIYTHL
DQTSWLIRAIPAFLFGMMTVPLAPVWDDSVEAMKKVAESKHGEEVLADLAFDWLDQPSER
WSGASKPQDPRRLPLTDFECLNMKGLHRTAEPIAQALEEPYRGMLEKFEEGQKIIDPHSQ
RARSMALKALNAIPRLAEKRSRNLVPYLFSFMSDGETPAEDQEDTEEEAEEMLEASWSLP
DRKALVGVFSQFNNPRVLYQADKVYTALLKLLANGDIEVQKLALKAILAWKNDAVKKKQE
HLEYLLDEARFKNELTVLFQGDNKIQPNEREAVMPVLLHLLYGRTISKKGAGSGRHGLHA
TRLAVIRQLNVDDMGDFLDIALGPLRNIRVVDAKGLNERLFSQEILPIRKQVGLLNMLEA
VITELGGAVSPYVESLANAILLCLISACRQVGVTTGEEESEETEETENVKDALLLKVIRT
ISLKCLCKLFQNEQSFDWTPYQDIMVKEIISPRIEKLAVETTQGVSATWKLLGTWAALPK
TAMFLAIDGRIVPNVVETLGMEKAKADVKIYALEMIKTLVGLAQASAQESEFNELIRSEL
LDPNVDLILGKISSLLRDQRDISRDLLGSAVDTVVVLSPIVKTSTSIQDIVEISTFLLNQ
PSRMVSPKIKGSILLILKGFMALEDFQGNAELKSKVYHTVASLFGYFKDRQNRQTLAEVL
AVFASTETWAQEIADTCRDLNAYKPRRLDEPDYNVRLTAFNSITRDRETPFTLDQWMPLL
HNMLFYIQQDEEFGVLSTNSADGLCKFIWAAKDAWGSAQQQAFITVVSDILLPAIYAGSK
EESETVRREILRVFGALVAGLPEWEMVSDLTPLVPSSEDSDQAFFFHVLSPAVARQLQAL
RLLESVNAKTPLHSKHISQFFIPLFEHFIFGHPEGGDDHGLGAQAITTVSGLTLSLEWQQ
YRAILRRFVSFVESKPDSQKRVIRLLEREVDALRTALDQKSSDAMEVDGEVQKSRLASTL
PDQEKLSTEIVGSFLPPLLKYIHEKDETEVSSRVPVGVIIAKLLVLLPDNLLNEKLPGVL
TDICHILRSKSVESRDMARDTLAKISGVLGAHRFGFILKELRGALVRGNQLHILSYTMHS
LLLVAIPAFEQGDLDYCLPQIMAVIMDDIFGATGQEKDAEGYTGKMKEVKGSKSQDSMEL
VAKTASIRRLSDLTMPLQSLLLEKLDVRTVRKIDELLTRITKGLLENPAAASQDVLIFCY
EVIQEVYKSNEPMEQPKMDPRLKRYIVQKAAKKSDGGVTAKHTYKLVRFAIDVLRTVFRK
HDHLRTAANIAKLLPIFGDAVLSAEEDVKIAAFKILTVIVKVPFKNDDSANLYKVALKEA
TKAISMSPTTTSDLAQAALKLISVILRDRREIVIKDAALDMLLGKLKDDLTEPLYRHVTF
NFLRSVLDRKMETAVVYDTLDYVGTIMITNPDKDTRDLARGAFFQFLRDYPQKRNRWEKQ
LQFIVANLKYEREGGRISVMEVINLLLKKSVDEFAQEVVATCFVPLIFVLANDDSEKCRL
SAGELLKESFRVADKERLSKFMQLLRTWIQQDDKPAVSKLALHAWGLYFEGREPNVNDKK
DLALVVDRITHVLGDDDALEADWELANTALNTLQTLVIKHPQKALAPSTSELWTEVQTCL
AHSNTTVKLTATRLLSMYLTDFAKTSGRDAKLPLKGSYGLELDEDDVTALVRLSLGILNV
VELDETLAQEIVQVLQFLGGYLESGKTEQEDSDEEEDEDEEEDKVDKSVSRKADMKYLFW
KLCSIIRKERQPKPEAMVSKLAAMDLLEAFCIKSPKETVEVSVRTILRPLRNLTDPSIRA
PFSLNELFKTRYEALKSKAVAVMEVLQRKLGSAEYTKALLEVGDQIRERRQARLSKRRIE
AVAAPEKYGREKRKKFEKKKERRKIKGQEQRDARRAFQGN
NT seq
7863 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccacaacttccggacgcattgttaagtcccaaaggggcgtcaagcggacgcct
cacgaaaagaatcacagatgggaatcattcagcaccaaaatctcaaagctccattcgctc
gatccgttgcgcaaagtgcgccgccatgacctcgaagccgaagatctcgaagcgagtacc
tcctacctcagaaatggcctcgacagatgggccgaactcaacctgtcaaagacctatgtg
tctttcaggctaaaagtcacccgttataccgattccctcgctcaaattctccatcatgaa
gacaagattatggacctcttggccgaggccatctcgacgcaccaaaaggattctttagag
ccgttactcgacctggtcactgcgttcgcccatgatctcggtgtgcgattcgagaaacac
tacccccgcgctctcggcttgatcgtggagctggcgagcaaagttcacgatgtagaagca
atcgaatggacctttgcgtcgctcgcattcctcttcaaatatctttcgagactagtcgtt
cctgacctccgacccacatacgatgcggtctctcctttgatgggcaaggcgaagattccg
ggacatattgctcggtttgcggccgaggcaatgagcttcttggtgaagaaagcggcggcg
cccagccacaaggagaaggctctaccgctctttgtggagcatgtgaggaaggacctggag
agtgtggccgggacgagacagtatgagctctatagccagggtatcatgactatgtttgcc
gaggcgctcaaggctcccaacaatggcgtccattcgactgccccggaggtctttgcagct
atcgtgcgggatgtgccagaaggagaagctgaccttcctgaacaaacagtatggacggat
gtctgctgcggtgtgcttaccagtatcattcaccatacaacaatcgagactttcaagacg
atcgaaacacgcatagtgcaagaggctacggctggtacacgcccagtgttatttgtgcaa
ctcctaggtgttgcggctggtgtacggaggggaaaccggattcacgactggtcagctctt
gtaaaagctctgggacaacagctcacgcagctgggtgaggtcaaggaaaggattgaggcc
atctcgcctcgccaagtatgggaccgcctaatcaccaggatagctattatttggggacaa
gcaccaatagacgctttgctgccatcattgtcaacactcaacaacaccacgaccaaggag
ccattaatgcggtggtacattccattttgctcctatctggccgatctccaccctgaacgg
ttcagagggctcttcctgaaagactttcaaaaatttgtcatcgcccattggtcccgaaac
tcaaacgaggagatgctctgcgtgcttctgcctcatatggtagaaaatgggggcctgccg
cgggtcaaagggaaagacggcttccttctcccgcaatcctggcaagatcagattgtcaac
aagtttgtacggcttgaagacacccctttcccggagagtggtggttttgggaaagatgcg
gagacgtggagggacagatgtctgccaaaatattcagcacttttacgggtgctggaggtt
acgacagtccatccctccaccaatgcccgtatcgccgaggttttgcttaagaagctaaag
ctcgccttacggccctcctcctctttaccaaccgatgaggccaacttcattatgagcgat
ggcttccgtgcctatctcagaatgtgtgctgcccctgggtcggtagatccaagtctggct
cctcttctcagagcagctaccccgcggttctgccactctccggcattcctcgaggccctg
ctcgcgtatctgatggagatcaaggcgaagggacgcagcagctcagaaaccagcagtggg
agtgacagcatgcaggaggaggaagacccattagtgaagtctctcgtcgacaacttgtcc
gcgccctctcatgaactccggcttgcgtccttgcgaattctggaaattctggagtcaact
cctgattccaactcagccttagcaacgatgcttcagtgtgaagagctgtctctgattttg
gaaaacgtacgaacgatcgctgttcacgttcgaaaactgggacaaatctacactcatctt
gatcaaacttcctggctcatacgggcaatcccagccttcttgtttggtatgatgaccgtc
cctcttgctccagtttgggatgactcggtggaagccatgaaaaaggttgccgagtctaag
catggcgaggaggttttagccgatttggcctttgactggttggaccagccttccgaacgg
tggtcaggtgcatccaagccccaagatccacgtcgcctcccgctcaccgactttgaatgc
ctgaacatgaaaggcctgcatagaactgctgagccaatcgctcaggccttggaggagccg
tacaggggcatgctggaaaagttcgaggagggtcagaagatcattgatccccactcgcaa
agggctcgcagcatggctctcaaagctttgaacgctatcccgcgcttggctgagaaacgc
tcaagaaacctagtgccatatctattttctttcatgagcgatggcgagaccccggctgaa
gaccaagaagacaccgaggaagaggctgaagaaatgttagaagcgagttggtcgcttcct
gaccggaaagccttagttggggtgttttcacagttcaacaatcctcgagtgctttatcaa
gccgacaaggtctatacggcacttctgaagctcttggcaaatggtgatatcgaggtgcaa
aagcttgccttgaaggccattttggcatggaagaatgatgcggtcaagaagaagcaggag
catctggagtacctccttgatgaggccaggtttaaaaacgagcttactgtccttttccaa
ggcgacaacaagattcagccaaacgagcgagaggccgttatgcctgttctgcttcacctc
ttgtacggccgtacgatctccaagaagggcgcaggcagtggccggcacggtcttcatgcg
acacgtttggcagttattcggcagcttaatgtggacgacatgggcgacttcctggacatt
gcgcttggcccactgcgcaacatccgtgttgttgatgccaaggggctgaatgaacggctc
ttctctcaggaaatcctgcccattcgcaagcaggtcggtctgctcaatatgcttgaggct
gtcatcactgagctcggcggtgcggtctccccatacgtggagtcccttgccaatgcaatt
ctcctctgtctcatctccgcctgccggcaggttggtgttacgacaggggaggaagagtcc
gaggaaaccgaagaaactgagaacgtgaaggatgctttgctcttgaaggttatcaggacg
atttctctcaagtgtctctgcaagctcttccagaatgagcaaagctttgactggacgccg
tatcaagacattatggtgaaggaaatcatcagtcctcggattgagaagcttgccgttgag
actacccagggcgtatcagctacttggaagctgctcggtacctgggctgctctccccaag
acagccatgtttttggccatcgacgggcgcattgtgcccaatgtcgtggagacgcttggt
atggaaaaggccaaggctgatgtcaagatatacgcgcttgaaatgatcaagacccttgtc
ggccttgctcaggcatctgcgcaggagtcagagttcaatgaactcataagatctgagctc
ttagatccaaatgtcgacctcattctcggaaaaatcagcagtcttcttcgtgaccagcgc
gatattagcagagaccttttgggttctgctgttgataccgttgttgtactctctcctatc
gtcaagacatccaccagcatccaggatatagtggagatttccacgttcttgctcaaccaa
ccctcgcggatggtcagccccaagatcaaaggttcaatcctgctgattctcaagggtttc
atggctttggaagatttccaggggaatgctgaactgaagagcaaggtctatcatacggtg
gcctctttgtttggctatttcaaggacaggcaaaacaggcagaccttggctgaagtgctc
gcagtgtttgcatccacagaaacatgggcacaagagattgcggatacctgccgcgatctc
aatgcttacaagccaaggcgtctggatgagccagactacaatgtccggttgaccgcattc
aactccatcaccagagatcgggagacgccctttactctggaccaatggatgcctctcctt
cacaacatgctcttctacatccagcaggatgaggaatttggtgtcctgtcgacaaactct
gccgatgggttgtgcaagtttatctgggcagccaaggatgcttggggcagcgcccagcaa
caagccttcatcactgtggtttctgatatcctgcttccggccatctacgctggatcaaag
gaggagtcagagactgtgagacgcgagattctacgcgtgtttggtgccctcgtggctggc
ctcccagaatgggagatggtctccgatctgacgcccctggttccttcgtccgaggactca
gaccaagccttcttcttccacgtcctcagtccggctgtcgcaaggcagttgcaggccctt
cgcttgctggagtcggtgaatgccaagacacctctccacagcaagcacatcagccagttt
ttcattcccctctttgagcacttcatctttggtcatccagagggtggcgacgatcatggc
ctcggcgcgcaggccattaccactgtttctggcctgaccctttctttggaatggcaacaa
tacagagctattctcagacgattcgtctcgtttgtggagtcaaagcctgactcccagaag
cgagtcatccgtcttctggagagggaggtggacgccctccgcactgcccttgaccagaag
tcaagtgacgctatggaggtggatggagaggtacaaaagagccgcctcgcgagcacactt
cctgaccaggagaagctcagcaccgagattgtcggcagcttcctgcctcccctcctcaag
tacatccacgagaaggatgagacggaggtcagctccagagtaccggtgggcgttatcatt
gccaagctgctcgtccttctcccggataacctcttgaacgagaagctccccggtgtcttg
actgatatttgccatatcctcaggagtaagtctgtcgaatcccgcgatatggccagagac
acgctcgccaagatctccggtgtcctcggtgctcacaggttcgggttcattctgaaggag
ttgcgtggtgctctcgtcagaggcaaccagcttcatatcctgtcctacaccatgcactct
ctgttgttggtcgctatcccagctttcgagcagggtgatctcgattactgcctgcctcag
atcatggctgtcattatggacgatatcttcggtgccacaggtcaagagaaggatgccgaa
ggttacactggcaagatgaaggaggtcaagggcagcaagagtcaggattccatggagttg
gtcgccaagacagcctccatccgtcgccttagcgatctgactatgcctctccagtctttg
ctgttggagaagctggacgtccgtaccgtccgcaagattgatgagctgctgactcgtatc
accaagggtcttcttgagaaccctgctgccgcttcgcaagatgtcctgatcttctgctat
gaggtcattcaggaggtctacaagtctaatgagcccatggagcaacctaagatggacccc
cgtctcaagagatatatcgtgcagaaggctgcgaagaagagcgatggcggtgtcacggct
aagcacacctacaagcttgtcaggtttgccatcgatgttctccggactgtgttcagaaag
catgaccacctccgtactgctgccaatatcgccaagttgctgcccatctttggtgatgct
gtactttccgcggaagaggatgtcaagatcgcggcattcaagatactcactgtcattgtc
aaggttcccttcaagaacgacgactctgccaatctgtacaaagttgcgctgaaggaagct
accaaggccatatccatgtcgcctaccaccacctctgacttggcgcaagcagctttgaag
ctcatctctgttatcctgcgtgacaggagggagattgtcatcaaggatgctgctctggac
atgctcctcggaaagctgaaggatgatctcaccgagcccttgtaccggcatgtaaccttc
aacttcttgcggtcagtcctggaccgcaagatggaaacggctgttgtttacgacacactc
gactacgtcggcactatcatgatcaccaaccctgacaaggacaccagagatctcgcgcgc
ggtgcatttttccaattcctccgagactatccacaaaagagaaacaggtgggaaaagcag
ctccagttcattgttgccaatctcaagtatgagcgcgaaggtggacgaatctctgttatg
gaggttatcaatctgttgctcaagaaatcggtggatgagttcgcacaagaagttgtggcc
acgtgcttcgttccgttgattttcgtcttggccaacgatgacagtgaaaagtgccgtctt
tctgcgggtgagctgctcaaggaatctttccgggtggctgacaaggagaggttgtccaag
tttatgcagttgttgaggacatggattcaacaggatgacaagcctgctgtttcgaagctc
gcgcttcatgcttggggtctctactttgaaggccgggagccaaatgtcaacgataagaag
gacctggctctggttgttgacaggattactcatgttcttggggatgacgacgctctggag
gccgactgggagcttgccaacaccgcgctcaacactctgcaaacgcttgttatcaagcat
cctcaaaaggccctcgctccgagcacgtccgagctgtggaccgaagtccagacttgcctc
gcgcactccaacacaaccgtcaaactcacagccacaagactcttgtccatgtacctcacc
gactttgccaaaacctctggcagggatgcgaagctcccactcaagggctcgtatggcctt
gagctcgacgaagacgacgtcaccgctttggtgcgcctttctctcggcatcctcaacgtc
gtcgagctagacgaaactctcgcacaggaaattgtccaagtcctccagttcctaggcggt
tacctcgagtccggcaagaccgaacaggaagacagcgacgaggaggaagatgaagacgaa
gaagaagacaaagtggacaagtctgtctcccgcaaggcagacatgaagtatctcttctgg
aagctctgctccatcatcagaaaagaacgccagcccaagcccgaagcgatggtgtccaag
cttgcggcgatggatttgctcgaagcgttctgcatcaagtcccccaaggagacggtcgag
gtttcggtcaggaccattctccgtccgttaaggaacctgactgacccgtccattcgcgcg
ccgttctcgttgaacgagcttttcaagacgaggtatgaggctttgaagagcaaggctgtg
gcggtgatggaggtgttgcagaggaagctggggagcgcggagtacaccaaggctttgctg
gaggtgggcgaccagattagggaaaggaggcaggcgaggttgagcaagagaaggatcgag
gcggtggcggcgccggagaagtatgggagggagaagaggaagaagtttgagaagaagaag
gagaggaggaagatcaaggggcaggagcagagggatgccaggagggcttttcaggggaat
tag
DBGET
integrated database retrieval system