Podospora pseudocomata: QC762_106550
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Entry
QC762_106550 CDS
T09797
Symbol
VPS8
Name
(RefSeq) Vacuolar protein sorting-associated protein 8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04138
Autophagy - yeast
ppsd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
QC762_106550 (VPS8)
04148 Efferocytosis
QC762_106550 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_106550 (VPS8)
Membrane trafficking [BR:
ppsd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
QC762_106550 (VPS8)
BRITE hierarchy
Motif
Pfam:
Vps8
Clathrin
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_16
zf-Nse
PHD
WD40
Motif
Other DBs
NCBI-GeneID:
87904958
NCBI-ProteinID:
XP_062747982
LinkDB
All DBs
Position
1
Genome browser
AA seq
1631 aa
AA seq
DB search
MSSSQAQGSNGPGDNMADVPELAPEADDHRLGSSSSDEETIRGERDEDYVTDAAILEEED
ENRPADVPIPTVEVDTSASIPNHYRGIVGASQEAASEDGSTDAIPRLAASPMGSNLSIPD
DTPSAQGSVVSSVGSSVMPSFARRPGMSPTPSFRPFDQRFQSGIASPHLSSPRPSSPAFL
AGHSRTVSVSSQFLLDSGETETPSPPWEVVRWTKLRKLNSQAFSEAGKRNFGTPTCLAVT
ANIVMGTSKGIILVFDYNQNLKLIIGPGTKAVESGPITSIAISADHSTIAGGHSNGNIFT
WDTTRAARPFLSIPHLDSTQVQRRTADGHVSNVAITHLGFLGTRHTALVSADDRGMAFSH
LATRGTGALGRTVKTTRILGRYPDSKPPVGKTLKPSTVLGFSSCPLGNVEMATDGMGLTA
MLTPYLLVIVSTTPIAQTQHKSARPKEVAAHSAMTGCLAWFPAVKLKVPDPVTGSQISKV
KLVYCWSNVLTVLDVDEIPEDDKEKLPSLKFRARSRWTCEESIAAVQWLSRSVLTVLTIS
QRLIVLEDRSMRMTEAFDLMGKHIYHADLFSKQLNPLVEQLDEDDDSMHGVVADAFYMSF
KAYKSRLFLLGFNDVSIGALSNWADRLIALMESGDYVGAIQLATSYYTGDANKLTVGLPE
DAKLRHSMVQDKLMEIMSASLKYAFGQRQKRKDSVTDAHLQELAETCFVACQSVGDEDFV
FDEMWEWYEDAEVEGIFLETLEPYILDGSITTVPPVVVKGMVTHFVSKGLESRLEELICH
LNTATLDLDQITLLCKQHSLYDALLYVWNQALQDFITPLLDLLALLVPLMQNGRYSGSAN
PIEDDIYGVNALKIFPYLSYVLTGRVYPTGEALSEEIAQRAKAELYWLLFSGKSITWPKG
SNKRLLTKPSQSQEPSFPYLRLILNFDAPSFLSALNEAFEDSFLNDSPEKQAATGSRPRD
LPEEQIFGLTVDRQYIVSILMEIMNPTDYETTDTIYLDMFIARNLPKYPQYLLFPGSTLT
KVLAGLCKFPGRDLAEDAQLSAEYLLSVYHPPDVNDLISLFKEAGFYRILKRIYKNDKQY
GKLIETYFDDPEDQEAVFSCIEVCLRPQAGLTRRQVQDVHQVIKRHAAQFVEIDPPMAAK
TIAKVAPELHHDVLQASGEQPGLQYSYLKAILEPQTEQRRIGSPDRDLVEQYLRLMCRFD
PAHVSDYVGLVQSTNLRLENLLPTMEETGVIDAAVILMAKEGQAQEAMGRLVKHLGTLES
AVQGLLAGSEPESNTEHLHQSVEELMEALRRYILVGIWLCQGQTKTVREANAGRRRQKPT
LDDALSSDEALWLDLIDIAVRITKQISTALRLSPAETPSENEKPNLPLGDNDKITTLLRS
LVQNTFTALLTCTSTPSPSSTTTAGMGSNLSFLRILRAFLTRAAASSPNLADLRSVLSSI
FAAYAYEESILRLSNRLLERSLFVSVNEAVALRQRGWRPRGSTCEACSRRVWGPGVAGNV
FEAWEEKQAVEEKKRKLRKALMSPNGDVGEDGTGGDEEEAYVGKGKGKGKAPSPRLRQED
GAVGDGDVQTAQDPREGRSDEAGAPRRREQPPLGPLVLLACRHIYHKSCLEELLAKDGQV
KENEYRCPIDG
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagtcaagcacagggcagcaatggcccgggagacaatatggccgacgtccca
gaactggccccagaagcagatgatcacaggctagggtcgagctctagcgatgaggagaca
ataagaggggagcgtgacgaagactatgttactgatgccgccatactggaggaagaggat
gagaaccggccagctgacgttccaatacccactgtcgaggtcgatacctctgcttccata
cccaaccactatcgtggaattgttggagcttcacaggaggctgcttcggaagatgggtcg
accgatgctataccccggttggcggcaagccctatgggttccaacctttcaattccagat
gatactccgtctgctcagggctccgtcgtttcctcggtgggtagcagtgtcatgccctcc
ttcgctcgccgacctggtatgagcccaacgccatctttcaggccgtttgaccagagattc
caatctggtattgcctcgccacacctaagctctccccgaccgtcctcacctgcctttctt
gctggacatagccgaacagtgtctgtgagcagtcagtttctactcgattcgggtgaaaca
gagacgccgtctccgccatgggaggttgtgaggtggacgaagctgagaaagctaaatagc
caggctttctcggaggcaggaaagagaaattttggaactccgacctgtcttgccgtcaca
gcaaatatcgtgatggggacatcaaagggcataatcctggtttttgactataaccaaaat
ctcaagttgatcattggtcccggaacaaaagctgttgagtcgggtcctatcacatcgatt
gccatttcggcagaccatagcactatagctggtggacactctaacggcaatatctttacc
tgggacaccacccgagcggcgagaccgtttcttagcataccccatctggactcaacacaa
gtccaacgcagaacggccgacggtcatgtctccaatgttgctatcactcacttaggattt
ctcggaacacgccacacagcactcgtttcggccgacgacagaggaatggccttttcacat
ctcgcaacgcggggcacaggagcactgggaaggacagtgaagaccactcgcattctcggg
cgctatccagactcaaaaccacctgttggaaaaaccctcaagcccagcactgtactaggg
ttttcctcatgtccccttggtaacgtcgagatggctactgacggtatgggcctcacggcg
atgctcaccccctatttgctcgtcattgtctccacaacccctatcgcgcaaactcaacac
aaatccgcccgtccaaaagaggttgcagcacacagtgccatgaccgggtgcctagcttgg
tttccagctgtgaagctgaaggtgccggaccctgttactggaagtcaaatttccaaagtg
aaattggtgtactgctggtcaaatgtcctcactgtactagatgtggatgagataccagaa
gacgacaaagaaaaactcccaagtctcaagttcagagcacggagccgatggacgtgtgag
gaatcgatcgcggctgtccaatggctcagcagatcagttctgacggttctcacgatatcc
caacggctgatcgtgctcgaagatcgaagcatgcgcatgacggaggcttttgacttgatg
ggcaagcacatctatcatgcagatcttttttcaaaacagctgaacccactggtggaacaa
ctggatgaagatgacgactcgatgcatggtgtcgttgctgacgcgttctacatgagtttc
aaggcgtataaaagccgcctgtttctcctgggattcaatgatgtttcgataggcgctctg
tccaactgggctgatcgcttgatcgcgttgatggaatctggggactatgtgggggccatc
caacttgccacgtcctactacacaggtgatgctaataagctcaccgtcggacttccagaa
gatgcaaaactcagacactctatggtccaggacaagctgatggaaatcatgagcgcctcg
ctcaagtatgcatttgggcagagacagaagcggaaagacagcgttacagacgctcatctg
caagagctggctgaaacctgctttgtggcttgccaaagcgtcggggacgaggactttgtc
tttgacgagatgtgggaatggtacgaagatgccgaggttgaaggcattttccttgagact
ttggagccatacatcctcgatggatctattacgacggtccctccagttgtggtcaaaggc
atggtcacccattttgtgagcaaagggctcgaaagccgcctggaggaactgatatgtcat
ctgaacaccgcgactctcgatttggaccaaatcaccctactttgcaaacaacacagcctt
tacgacgccctcctatatgtctggaatcaagcccttcaagatttcattacgcccctcctc
gatttgctggctttattggtaccattgatgcaaaacggccgatattcaggctcagcaaac
cccatcgaggatgatatttatggggtcaatgccctcaagatcttcccatatctttcatat
gtcctcacgggacgggtgtacccgactggtgaggccctgtcagaagagatcgcgcagagg
gcaaaggctgagctttattggcttctcttttctggcaaaagcattacctggcctaagggc
agcaacaagcgactcctcacgaagccttctcagtcgcaggagccgtcgtttccctaccta
cgattgatccttaactttgatgcgcccagctttctgagtgccctcaatgaagcgtttgaa
gattccttcctcaacgattcgcccgagaagcaggcggcaaccggcagccgaccacgagat
ctaccagaagagcaaatcttcgggttgactgtagacagacagtacattgtctccatcctg
atggagatcatgaacccgaccgactacgaaacgaccgacacgatctaccttgacatgttt
attgcgagaaacctccccaaatacccacaatatctgctgtttccaggctcaactcttacc
aaagtgctcgcgggactctgcaagtttcccggccgagacctggccgaggatgctcagctg
agtgcggaatacctgctttcggtataccatccaccagatgtcaatgacttgatttccctt
ttcaaggaagctggattctatcgcattttgaagcgcatctacaagaacgacaagcaatat
gggaagctcattgagacttattttgacgaccccgaagaccaagaagctgtgtttagctgc
attgaggtctgcttacgaccgcaagcgggccttacacggcggcaagtacaggatgttcac
caagtcatcaaacggcacgcggctcagtttgtcgagatcgaccctcccatggcagccaaa
accattgcaaaggttgcgcccgagctgcatcatgatgtccttcaagcatctggtgagcaa
ccgggactgcaatattcgtatctcaaggccatcctggagccacagactgaacaacgtcgt
attgggtcgccagatcgggatttggttgagcagtatctgcggctgatgtgcaggtttgat
ccagcacatgtgtctgactatgttgggctggttcagtctaccaatctacggcttgaaaac
ttgcttccaacgatggaggagacaggcgtgattgatgcggctgtcatacttatggccaag
gaaggtcaggctcaggaggcaatgggtcggttggttaagcacctcggaacactagaatct
gctgtccagggtctgcttgcaggttctgaacccgaatcgaacactgagcaccttcatcag
tctgtcgaggagctgatggaggccttgaggaggtacatcctagtcggcatctggctttgc
cagggacagacgaagactgtgcgggaagccaatgctggtcgtcgacggcagaagcctact
cttgacgatgcactgtcttctgatgaggctctctggcttgatctgattgatatcgcggtg
cggatcaccaagcagatctctacggccctccggttgtctccggcagaaactccctccgag
aacgagaagcccaatctaccattaggcgataacgacaaaatcaccactcttctccgctct
ctggtgcaaaacacttttaccgcactgctcacatgtacttcaaccccatcaccttcctcg
accacaactgccggcatgggcagcaacctgtcctttctccgaatcctcagggcgttcctc
acacgtgcggctgcctcctctcccaacttggccgaccttcgctccgtcttgtcgtccatt
tttgcggcgtatgcgtatgaagagtcgatcctgcggctttccaaccggcttcttgagcgg
agtttgttcgtcagtgtcaacgaggcggtcgcgctccggcagcgaggatggcgaccacga
ggctcaacctgcgaggcttgcagtcggagagtgtggggtccgggggtggctggaaatgtg
tttgaagcttgggaggagaagcaagcggtggaagagaagaagaggaaactgagaaaggcc
ctgatgtcaccgaatggtgatgtcggtgaggatgggacaggtggtgacgaggaagaggct
tatgttggcaagggcaaagggaaaggaaaggcacctagtcccaggttaagacaggaagat
ggggcggtcggtgatggcgatgttcagacagctcaggatccccgagagggacggtctgat
gaggctggggctcctaggaggagggagcagccaccgttggggccgttggtcttgcttgcg
tgtagacatatttaccacaagagctgcttggaggagctgttggcgaaggatgggcaggta
aaggaaaatgagtatagatgtcctattgacgggtag
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integrated database retrieval system
