Podospora pseudocomata: QC762_108250
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Entry
QC762_108250 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K18715
nucleoporin NUP159
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_108250
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC762_108250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_HPS5
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
87905146
NCBI-ProteinID:
XP_062748189
LinkDB
All DBs
Position
1
Genome browser
AA seq
1513 aa
AA seq
DB search
MAFGFGNASNAMMGAPSAGGVGGLSQGSDLEVIQTEGLGFLSLAGDSKVQLTSKWQPAPA
PTASLLSIAPRKGLVAAASPDAVHIATTESVRKAFEAPKNGDSDVRPFTPQAKVPLGIRI
SQLAFTVDEQFLILSAESGGGLAVYNTDTLTQGGTQSAFEIPTNSESLRALVPNPSPDLS
HFVAIVTDKGNLLMANLAEKKLVSGANGPVLRSQVSCVSWSTKGKQLVAGVADGSIYQMT
PEGVEKAHIPKSPSVGDYHVASLAWIENHVFLAVYNQTNGQDPSVFNLITRHQPPGGTPT
FTYQKITDPVEPFVADKTPHHTILRLKDFPPNLDECLLVASTANEGIGLLTRSKTPLTQD
KDADKITNVFTTTEFADDSKRAQLPMGEDLTDTFPIGATLDLSSKEKVYKPIPTDEIENS
PGPLPGLWVLNNEGVLVSWWVVYNESIRAGTTYPGIVGGSAAQAITPAAPASSGVSAFGS
PAVASSGASAFGSSALASPGVSAFGEPSPAPAFGIPSSPAAFGGSSALGAKASPWATASG
TSAAPAFGSSAFGSKPAAAVPAFGAPAFGQPSAPAFGQSSLGLGAAKPSPWATGTTASAA
PAFGQSGLGSSAAAASKVFGSGAAPPAGGFASFASKGGFGSLGGASSGSSIFGSKPAGSA
PAPEVSMDTPTAFPPPAAKTDRPAFGASPFVLGSTFKADTSSAASAFETKKPEGSSMFGS
GFSSALEAPASKDEDMDRVTPAPEEKPKSVFGDLGSTTPTSTPAPSKFGFQTAGAEAAKT
TLFAPKASAPTSSIFGTPGPASSGLFKPKPETDLFGQPKPAANPFGTPTPAAANVFGSPK
PAENPFGAPKIKQEESDKENVKSVPAAPLPPDATNTKAPVKAEEAPLPPDFMKPGPPSKE
TSKSPGFSESDTGRMPPNLLSTKPKPEVYDAKPPTPEEAPLPPDFIGKPATKLPDVPAVP
ESPDGSELSECDAEDQTHELEEGEVDEEEEEYDEEESEGSGVDVTKEFSPTTGGFESHTP
GITPHGSFDGGMTGSAFSTISRSEANQGRPLFGEINTRNAPSFPKPVPTSPRSPSPMRGP
PRASLLRPGPPDTPRSFAPGVASDLLGRRSAPPATSPFGSAPASRARPQEVDPNIKAQMR
LAAKREEEAKQALVDPEDEGIQQLLRSKIEPTLQIDEFLATDTRLKEIEKRGENEIPAAC
EALWRDINRMIDRLGLNSRALQSFILGHTTLRKEDGRDQDDLEHLDDWVIVEAEDLGKII
DNQLSRRLEEGRIQEIDRVEDEISGLMRDLTKLRAKEEDMRKIIMAHVDPDQVNVAKSLP
LSAEQAAQQNELRRSFATFSGLLAEAEEALTLLKAKIASAGGASGRAPVPTVDAILRTIQ
KMTSMAEKRSGDIDVLENQMRRLRLGTPARSREGSPFVGGGGPATPTPNNRRSLLMSPGR
GESPFGASVRMGSVGPGGGGGVGPSPRKKLSQFSEEEKKVLRERERRRKNVLGLLRGSLE
RTGGNVSRLRDDE
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggctttcggttttggaaacgcgagcaatgccatgatgggcgcaccttccgctggcggg
gttggggggttgtcgcaaggaagcgatctcgaggttatccagacagagggtcttggattt
ctctctctcgccggcgattcaaaggttcagttgacctcaaaatggcagcctgctccagcc
ccaacggcatcccttcttagcattgcccctcgaaagggtctggttgctgcggccagcccg
gatgcggtacacatcgccacaactgagtctgtacggaaagcgttcgaggcccctaagaat
ggcgatagcgacgtccgaccgttcacaccccaggccaaggtgccgcttggcatcaggatc
tcacagttagccttcaccgtggatgaacaattcctcattctttccgccgagtcgggcggt
ggtcttgctgtctacaataccgacacgcttacacaaggcggcacgcaatccgccttcgaa
atacctacaaattcggaatctctcagggctctggttccaaatccttccccggatctctcg
cacttcgtcgccatcgtgacggacaaaggcaacctcttgatggcgaaccttgcggagaag
aagcttgtatcgggcgcgaatgggccagtacttcgttcgcaagtcagctgtgtctcatgg
agcaccaagggaaaacagctggttgctggtgtagctgacggctccatctaccaaatgaca
cccgaaggtgtggaaaaggcacatattccaaagtcccccagtgttggagattaccatgtc
gcctcgttggcctggattgagaaccacgtgttccttgctgtttacaaccagacaaatggt
caagatccatctgttttcaacctaatcacccgccatcaaccaccaggaggaacacctacg
ttcacctatcagaagatcactgacccggtagagccttttgtggccgacaagacaccacac
cacactatcctcaggctgaaggatttccccccaaatctcgacgagtgtttgctggttgcg
tcaacggccaatgaaggcattggtttattgacacgctccaagacccccttgacacaggac
aaggatgcggacaagatcacaaatgtgttcacaacaactgagtttgctgacgattctaag
cgtgctcagctccctatgggcgaggacctgaccgatacgtttcctatcggagcgacgctc
gacctgtccagcaaggaaaaggtttacaagcccatcccgacggacgaaatcgagaactct
cccgggcctctccctggcctgtgggtgctcaataatgaaggcgtgcttgtgtcctggtgg
gttgtctataacgaatctattcgggccgggacaacgtatccgggcatcgtaggagggtcc
gccgctcaggcaatcacaccagcggccccagctagctctggcgtctctgcctttgggtct
cctgctgttgctagctctggagcttctgcttttgggtcctctgcccttgccagccctgga
gtctctgcctttggcgaaccctctcctgctccagctttcgggataccgtcctctcccgcg
gcattcggtggttcctctgctttgggagccaaggcttcaccctgggctaccgcatcaggt
acatctgctgccccagcgtttggttccagcgcgttcggtagtaaaccagctgctgctgta
cctgcgtttggtgcccctgcttttggccagccatcggcccctgcgttcggccagagttca
ctaggattgggggcagctaagccttctccatgggccacgggaacaactgcttctgcagca
cctgcctttggacagtcaggtttaggcagctcggcagccgccgccagtaaggtgttcggt
agcggtgctgctccaccagctggtggttttgccagttttgccagtaagggtggctttggg
tctctgggcggtgcttcttccggatccagcatcttcggatcaaagcctgctggctctgcc
cccgcccctgaagtctcaatggatacacctacagcattccctccgccggctgcgaagacg
gacagacccgcttttggggcttctccttttgtattgggaagtacattcaaggctgatacc
tcaagtgctgctagtgcctttgaaactaaaaagccagaaggcagctccatgtttggaagt
gggttcagctctgccttggaagccccagcttccaaggatgaggatatggatagagtaacg
ccagcgcccgaggagaagcccaagtctgtatttggtgacctcggatctactacgccaaca
tcgacaccggccccctcgaagttcggcttccaaactgctggcgccgaagctgccaaaacg
accctatttgccccgaaggcctcagctcccacatctagtatctttggaactccaggacct
gcttcgtcggggctttttaagccaaagccggaaactgacctctttggtcaaccgaagcct
gctgctaatccctttggcacaccgacacctgccgcggcaaatgtatttgggtcaccaaag
cctgcggaaaatcctttcggagcaccaaagatcaagcaagaggaaagcgataaagagaat
gttaagagtgttccggcggcccctctgccgccggatgcaactaataccaaagctcctgtg
aaagcagaggaggcgccactccctccggatttcatgaaaccaggccccccctcgaaggaa
acatccaagtcaccaggattcagtgaaagcgatactgggcggatgccccccaacctgctt
tcgaccaaaccgaagcctgaggtctacgatgccaaaccacctacccctgaggaggccccc
ttgccgcctgactttatcggcaagcctgccaccaaacttccggatgtccctgctgtgcca
gaaagccccgacgggagtgaactatcagaatgtgacgcggaagatcagactcacgaactt
gaggaaggtgaggttgatgaagaagaggaagagtacgatgaggaagaatcggaaggcagc
ggcgttgatgtgactaaggagttcagcccgacaactggcgggtttgagagtcacactcct
ggcatcactccccatgggtcttttgatggtggcatgactggaagtgcgttctcgaccatt
tcaagatccgaggccaaccaaggtcgcccgctttttggcgagatcaacacgaggaacgcc
ccgtcgttccccaagccggtgccgacaagccctcgatcgccgagtccgatgcgaggtcca
cctcgggcgagccttctccggcctggtccccccgacactcctcggtcctttgcgccaggt
gttgcgtcggatctcttgggacgtcgctcagcacccccggctaccagcccgttcggttct
gctccagctagccgggcgcggccacaggaggtcgaccctaacatcaaagcccagatgagg
ctcgcggccaagcgagaagaagaagccaagcaagccctcgtggatccggaagacgagggc
atccagcaacttctccgctccaaaattgagcctactctgcagattgacgagttcttggcg
acggacacaaggctcaaggaaattgagaagcgcggagagaacgagatcccagctgcgtgc
gaggctctctggcgggatatcaaccgcatgattgatcgcctgggcctcaactcccgagcg
ctccagtctttcatcctcggccataccaccctccgcaaggaggacggccgcgaccaggac
gatctcgaacacctcgatgactgggtcattgtcgaagctgaagatctcggtaaaataatc
gacaaccaactctcccgtcgcctggaagagggccgcattcaagagattgaccgtgtcgaa
gatgagatttctggcctgatgcgggacctgaccaagctccgcgccaaagaagaagacatg
cgcaagatcatcatggcgcatgtcgatcccgaccaggtgaatgttgccaaatctttacct
cttagtgcggagcaggccgcgcagcagaatgagctcagacgatccttcgcgacgttttcg
gggctgttggcggaagcagaagaggcattgacgctgctcaaggcaaagattgcttctgca
gggggtgcgagcggtagagcacctgttcctacggtggatgccatcttgagaacgattcaa
aagatgaccagcatggcggagaagaggagcggggatattgatgttttggagaaccagatg
aggaggttgaggttggggactccggcgaggagcagggaggggagtccgtttgttggtgga
ggagggccggccacgccgacgccgaataataggaggtcgttgttgatgagccccggcagg
ggggagtcgccttttggggcgtcggttaggatgggaagtgttggacctggcggcggtggt
ggggtggggcctagtccgaggaagaagttgagccagtttagtgaggaggagaagaaggtg
ctgagggagagggagaggaggaggaagaatgtgttggggttgttgagggggagtttggag
aggacgggggggaatgttagtcggttgagggatgatgagtag
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