Podospora pseudocomata: QC762_108810
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Entry
QC762_108810 CDS
T09797
Symbol
MSH3
Name
(RefSeq) Mismatch repair protein msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QC762_108810 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_108810 (MSH3)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
QC762_108810 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
RYDR_Jsol
DUF4911
Motif
Other DBs
NCBI-GeneID:
87905206
NCBI-ProteinID:
XP_062748253
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Position
1
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AA seq
1122 aa
AA seq
DB search
MVGSSKPSEKKQSSLTSFFTPKTVNGLSQKLAAQKPAKDDSKAGRSSSPSAPGPSQVSRF
KRPLQEDNDSGNGTEKTTRSSRLTKRAKRVLDDDDESENQELPSSPPAGNGPSSSRTGKY
VYDEGSASKTGAPDEDETEDAATRRKKEELHKKFVKKLGHPDSMSYMKRRNGAPDSSTPG
LEGDDAEGEDEAEEDEPPPTKGKKKGAKTGKLTPMEIQFLDIKRKHMDTLLIVEVGYKFK
FFGEDARIAAKELSIVCIPGKFRYDEHPSEAHLDRFASASVPVHRLNVHAKRLVAAGHKV
GVVRQVETAALKKAGDNRNAPFVRKLTNVYTKGTYIDETGELDQPGDATGAPSGGYLLCL
TESPTKGSGTDEKVQVGIIAVQPATGDIIYDDFEDGFMRREMETRLLHISPCEFLIVGDL
SKASDKIVKHLSGSRTNVFGDRSRVERVPKSKTMAAEAHSHVTQFYADKTKEDDENSAAL
LEKVLKLPESVTICLSAMINHLTEYGLQHIFGLTKYFQSFSTRQHMLINGTTLESLEVYR
NSTDHSEKGSLMWALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVTAVEELLEKQSAIQV
SKLTGMLASIKADLERSLIRIYYGKCTRPELLSTLQTLQKIAMEYHRVKSPAETGFKSSL
LQETLLSLPAIGDIVTSYLDKINAQAARKDDKYNFFREEEETDDITDHKLGIAAVEADLD
AYRKEATAKLKKKVLVEYTTVSGIEYLIEVANTDLKNVPASWAKTSGTKKVSRFHTPEVI
KLISERDQHREALAAACDAAFSALLSSLAAEYQPLRDAVSSLATLDCLLSLSQVASLPGY
SKPNFLPITAPPSISIVEGRHPIAEHTLSTPYIPFTTSLSSPAPLAQLITGPNMGGKSSY
VRSVALLVLLAQMGSYVPATEMTLTPCDAIFTRMGARDNLFAGESTFMVEVSETASILRS
ATPRSLVILDELGRGTSTHDGAAIAHAVLDYVVKEVGCLTLFITHYQNLARVAEGLGDGR
VRCVHMKFRVERGGDGDGQEEEVTFLYEVAEGVAHRSYGLNVGRLARLPKQVLEVAGVKS
REMEEGVKERRLKGVVGLLGELMNGEKGEEELEQLVEGIEQL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggttgggtcttcgaaaccatccgaaaagaagcagtcatccttgactagtttcttcacc
ccaaagactgtcaatggcttgtcacagaagttggctgcccagaagccagccaaagacgac
tccaaagctggacgctcgtcctcgccatcggcccctggaccgtctcaagtctccaggttc
aagcgacctctccaagaggacaatgactccgggaatgggactgaaaagactaccaggtct
agccgtttgaccaaacgcgccaagcgtgtccttgacgacgatgacgagtccgagaatcag
gagcttccaagctcgcctcctgctggaaatggcccaagttcatccagaaccggaaaatat
gtctacgatgaggggtccgcctcaaagactggcgcacccgacgaggacgagaccgaagat
gcggcaacgagacggaagaaggaggagctgcacaagaagtttgtcaagaagcttggccat
ccagacagcatgtcgtacatgaagaggcgcaatggtgccccagacagttctactccaggc
ctggagggtgatgacgccgaaggagaggatgaggctgaggaggacgaaccaccaccgacc
aagggcaagaagaagggtgccaagactggcaagcttacgcctatggaaatccagtttctc
gatatcaagaggaaacacatggatactctcttgattgtcgaagttggttacaagttcaag
ttctttggcgaggatgctcggatagctgccaaagagctgagcattgtgtgcattcctggc
aaattcagatacgatgagcatccatccgaagcccatctcgaccgattcgcctctgccagc
gtgccagttcaccgactaaacgtacacgccaaacgccttgttgctgctggtcacaaagtt
ggtgttgtccgccaagttgagactgcagccctcaagaaagccggcgacaatcgcaacgca
ccattcgtccgaaaacttaccaatgtctacaccaagggcacatacatcgacgagacaggg
gagctggatcaaccgggagatgccactggtgctccatctggtggctatctgctttgtctt
actgaatccccgaccaaggggtctggcactgatgagaaagtgcaagtcggaattattgcc
gtacagcctgcaaccggagatatcatctatgatgactttgaagatggcttcatgaggcgg
gagatggagacccggttgctccatatctcgccttgcgaattcctcattgtcggtgacttg
tccaaggcctccgacaaaattgtcaagcatctttctggcagccgtaccaacgtgttcggt
gatcgaagtcgggttgagcgggtgcccaagtcaaagacgatggctgctgaggctcactct
catgtcacccagttttatgctgacaagaccaaagaggatgacgagaactcagcagcgctt
ttagagaaggtcttgaagctgccggagtcagtcaccatctgtctgtcagcaatgatcaac
catctcaccgaatatggcctgcaacatatctttggtttgaccaagtactttcagtcgttt
agtacacgacagcacatgttgatcaacgggacaacacttgagagtctcgaggtctaccga
aactctacggaccactctgaaaagggtagtctgatgtgggcattggacaaaacccagacc
aggcctggccagagactgctgagaaaatggattggtcgtccattgcttgaccagcagcgg
ctagaagagcgtgtcactgcagtagaagagcttctagagaagcagtctgccattcaggtt
agcaagctgaccggcatgctggcctcgatcaaggccgatctggagcgcagcttgatccgt
atatactacggaaagtgcactaggccagagcttctgtcaacccttcagactctccagaaa
atcgccatggagtatcacagagtgaagtctccggcagagacaggcttcaagtcaagcctg
ctccaggagacccttctctctctgcctgccatcggtgatatcgtcacctcctacctcgac
aagatcaacgcccaagccgccagaaaagacgacaaatacaacttcttccgcgaggaagag
gagacagacgacatcaccgatcacaagctggggatcgcggcggtagaggccgatctcgac
gcctaccgcaaagaagccacggccaaactcaagaagaaggttttggtggaatacaccacc
gtctccggcatcgaatacctcatcgaggtagccaacaccgacctcaaaaacgtccccgcc
tcttgggccaaaacctctggcaccaagaaggtctctcggttccacaccccagaggtgatc
aaactcatcagcgagcgcgaccagcaccgcgaagccctcgccgccgcctgtgatgccgcc
ttttcggctcttctctcgtctctcgcggcggagtatcaaccactccgcgacgccgtctcc
tctctcgccacattggactgtcttttgtccctctcccaggtggcctccctaccgggctac
tccaaacccaacttcctccccatcacggcccccccttcgatttccatcgtcgaaggccgc
caccccatagcagaacacaccctttccactccttacatccccttcaccacctccctctcc
tcgcctgcccccttggcccaactgatcacaggccccaacatgggcggtaaatcctcctac
gttcgctccgtcgcgctcctcgttttgcttgctcagatggggagctacgtccccgcaaca
gaaatgacgctcaccccctgcgacgccatcttcacccgcatgggcgcgagggataacctc
tttgcgggggaatcaacctttatggttgaggtcagtgaaacagcttctattctccgctcc
gccaccccgaggagcctggtgattctggatgagctgggcagggggacgtcgacgcacgac
ggtgcggcgattgcgcatgcggtgctggattatgtggttaaggaggtggggtgtttgacg
ttgtttatcacgcattatcagaacctggcgagggtggcggaggggttgggggatgggagg
gtgaggtgtgtgcacatgaagtttagggttgagagagggggggatggggatgggcaggag
gaggaggttacgtttttgtatgaagttgccgagggggtggcgcatcggagttatgggttg
aatgtggggaggttggcgaggttgccgaagcaggtgttggaggttgcgggggtgaagagt
agggagatggaggagggggtgaaggagaggaggctaaagggggtggtggggttgttgggg
gagttgatgaatggggagaagggggaggaggagttggagcagcttgtggagggtattgaa
cagctttag
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