Podospora pseudocomata: QC762_109120
Help
Entry
QC762_109120 CDS
T09797
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_109120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_109120
Spliceosome [BR:
ppsd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
QC762_109120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR54
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Nbas_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
87905241
NCBI-ProteinID:
XP_062748290
LinkDB
All DBs
Position
1
Genome browser
AA seq
546 aa
AA seq
DB search
MTRNQPKIQTKSIPTAVMMHPSRRAYVEEADTEDRGSGGIDIDAIPIDRDYDIPGAGAGI
APERASAIISQFERKRFAATIAVPTDDGRVRAKLRELGEPITLFGEGPVDRRDRLRELLT
EQAQQATGQESADVEMQDASNDEEAEEQEEEFYSRGTQELLDARIEIAKFTIPRAKRRVE
FQKKEATIPLRTHVKFRKEIKERLQTFELQASQTAGDRHVSMTRFSPDGQMIATGNWGGQ
VKLIDIPTLEHRKTLRGHTNKISGLAWRPGATLPEANISEDTVNLASGGAEGQVHLWSLN
QDTPLSTLSGHSQRVCRVEFHPSGKYLASASEDTSWRLWDVETTTELLLQEGHSRGVYAV
SFNTDGSLLASAGLDSIGRIWDLRSGRTVMILDGHLDGHIKPIYGLDWSPDGHRVLTASA
DGWIKCWDVRKVQRTGGIGAHTSAVSDVRWFKGMDEPVDGKPPGEDDKGNQLPKKSGTFL
VSSGFDHKVNIFSADDWALAQSLSGHTGPVASVDVSRDGKWIISGGHDRTVKLWGRNDAT
GVYGDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaaccagccaaaaatacaaacaaaatcaatacccaccgcagtcatgatgcac
ccatcacgtagggcgtatgttgaggaggctgatactgaggaccgaggaagtggaggcatt
gacatagatgccattccaatcgaccgcgactatgacatccccggagccggcgcaggcatt
gcgcccgagagagcatcagccatcatctcacaattcgagcgtaagcgattcgccgccact
atcgcggtcccaaccgacgatggacgtgtccgcgccaaacttcgagagctaggcgagcct
atcacgctgttcggcgaaggaccggtcgatcgacgcgacaggttacgagagcttcttacc
gagcaggcgcagcaggcgacaggccaggagagcgcagatgtggagatgcaggatgctagc
aacgacgaggaagcggaagagcaagaggaagagttttactctcggggaacacaggagctt
ctcgatgcccgaatagaaatcgccaagtttacgatcccccgagcgaaacggcgcgtcgag
tttcagaagaaggaggctacgattcctctccgtacccatgtcaagttcaggaaggagatc
aaggagcggcttcagacgtttgaattgcaagccagtcagactgcgggagatcgtcatgtg
agcatgacgaggttttcgccagatggacagatgattgcgactggaaattggggcggtcaa
gtcaagcttatcgatataccgactttggagcatcgcaagacgctgcgaggacataccaac
aagatcagcggtttggcctggaggcctggtgctacccttcccgaggccaacatctcggag
gacacggtcaaccttgcttcgggtggtgcagagggccaggttcatctttggtcactaaat
caagatacaccgctatcgacgctctctgggcactcgcaaagagtatgccgtgtcgagttt
cacccttctggaaaatacctcgcatctgcgtctgaggacacgtcgtggaggctgtgggat
gtcgaaacaacaaccgaactgcttcttcaagagggacactcgcggggagtgtacgccgta
agcttcaacaccgacgggtccttgctggccagtgcaggtctggacagtattggaagaatc
tgggatttgcggtcgggacggacagtcatgattctcgacgggcatctggatggccacatc
aagccaatctacgggctggactggagtccggacgggcaccgggtcctcacggcctcggca
gatggatggatcaaatgctgggacgtgagaaaagtgcagaggacaggcggaattggtgcg
cacacaagcgcggtatcagatgtcagatggttcaaggggatggatgagcccgttgacggg
aagccaccaggcgaggacgacaagggaaaccagttgccaaagaagtctgggacgtttttg
gtgtcgtctgggtttgaccacaaggtcaacattttctcggctgatgactgggctcttgct
cagtcgctgagcggccatactggcccagtagcgagtgtcgatgtaagccgggacggcaag
tggatcatcagcggtggacatgatcggactgtcaagttatggggtcgtaatgatgcaacc
ggtgtgtatggtgacttttag
DBGET
integrated database retrieval system